RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 LRIG1Q96JA1 1093 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 FRMD6Q96NE9 622 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 KCNS3Q9BQ31 491 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 TMEM246Q9BRR3 403 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 POLDIP3Q9BY77 421 aaKnown RBP10.86□□□□□ -0.67
USF1-201ENST00000368019 BARHL1Q9BZE3 327 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 TM6SF2Q9BZW4 377 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 ACOXLQ9NUZ1 547 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 ERVK13-1Q9NX77 482 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 MRPL39Q9NYK5 338 aaKnown RBP10.86□□□□□ -0.67
USF1-201ENST00000368019 REV1Q9UBZ9 1251 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 EXO1Q9UQ84 846 aaKnown RBP10.86□□□□□ -0.67
USF1-201ENST00000368019 HS3ST2Q9Y278 367 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 PCDHGB7Q9Y5F8 929 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 KCNE2Q9Y6J6 123 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 PRAMEF33A0A0G2JMD5 474 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 A0A1W2PQ09 198 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 TMEM129A0AVI4 362 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 ARHGEF33A8MVX0 844 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 B4DXG7 233 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 E7EQ34 232 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 PCDH17O14917 1159 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 MYL12BO14950 172 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 POLR1CO15160 346 aaPredicted RBP10.85□□□□□ -0.67
USF1-201ENST00000368019 SSX4O60224 188 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 PRAMEF10O60809 474 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 TMCC2O75069 709 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 ZNF821O75541 412 aaPredicted RBP10.85□□□□□ -0.67
USF1-201ENST00000368019 ETFAP13804 333 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 GALP22466 123 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 MYL9P24844 172 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 EPHA8P29322 1005 aaPredicted RBP10.85□□□□□ -0.67
USF1-201ENST00000368019 FGF9P31371 208 aaPredicted RBP10.85□□□□□ -0.67
USF1-201ENST00000368019 NUDT1P36639 197 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 METAP1P53582 386 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 DSTNP60981 165 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 PPP2CBP62714 309 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 POLR2LP62875 67 aaKnown RBP10.85□□□□□ -0.67
USF1-201ENST00000368019 PPP2CAP67775 309 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 HBA1P69905 142 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 PTSQ03393 145 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 IKZF1Q13422 519 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 ELAVL3Q14576 367 aaKnown RBP10.85□□□□□ -0.67
USF1-201ENST00000368019 QPRTQ15274 297 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 SEC23BQ15437 767 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 KLHL22Q53GT1 634 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 ZNF385BQ569K4 471 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 CCDC157Q569K6 752 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 DDI2Q5TDH0 399 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 REEP3Q6NUK4 255 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 CASP12Q6UXS9 341 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 TSPAN33Q86UF1 283 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 VRK3Q8IV63 474 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 PHC2Q8IXK0 858 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 LRRC56Q8IYG6 542 aaPredicted RBP10.85□□□□□ -0.67
USF1-201ENST00000368019 TRAM1L1Q8N609 369 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 DUSP18Q8NEJ0 188 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 OR14C36Q8NHC7 312 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 ELMO1Q92556 727 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 MAL2Q969L2 176 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 VOPP1Q96AW1 172 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 NEDD4LQ96PU5 975 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 CNPPD1Q9BV87 410 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 POLR2J2Q9GZM3 115 aaKnown RBP10.85□□□□□ -0.67
USF1-201ENST00000368019 RNF121Q9H920 327 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 ANKRA2Q9H9E1 313 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 FGF20Q9NP95 211 aaPredicted RBP10.85□□□□□ -0.67
USF1-201ENST00000368019 EXOSC4Q9NPD3 245 aaKnown RBP10.85□□□□□ -0.67
USF1-201ENST00000368019 C14orf119Q9NWQ9 140 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 TRPM6Q9BX84 2022 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 SETXQ7Z333 2677 aaKnown RBP10.85□□□□□ -0.67
USF1-201ENST00000368019 ATMQ13315 3056 aa10.85□□□□□ -0.67
USF1-201ENST00000368019 SLC5A10A0PJK1 596 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 TSPAN11A1L157 253 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 KRT87PA6NCN2 255 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 SNTNA6NMZ2 147 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 NOTOA8MTQ0 251 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 K7ERQ8 282 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 RGS5O15539 181 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 ARHGEF9O43307 516 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 RFPL3O75679 317 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 POP4O95707 220 aaKnown RBP10.84□□□□□ -0.67
USF1-201ENST00000368019 RAB36O95755 333 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 C6orf47O95873 294 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 RECKO95980 971 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 GASTP01350 101 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 C1QBP02746 253 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 OPN1SWP03999 348 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 CSF3P09919 207 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 MAGP20916 626 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 LHCGRP22888 699 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 AQP1P29972 269 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 PKLRP30613 574 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 SDC2P34741 201 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 ARRB1P49407 418 aaPredicted RBP10.84□□□□□ -0.67
USF1-201ENST00000368019 CLDN6P56747 220 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 ZNF91Q05481 1191 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 TPBGQ13641 420 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 HEPACAMQ14CZ8 416 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 RTP5Q14D33 572 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms