RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 LATO43561 262 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 C1QBP02746 253 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 AHRP35869 848 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 ZNF81P51508 661 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 ATP12AP54707 1039 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 RPA4Q13156 261 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 FAM27D1Q5T7N8 215 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 TMEM107Q6UX40 140 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 HTR3DQ70Z44 454 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 PRICKLE2Q7Z3G6 844 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 COMTD1Q86VU5 262 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 NUDT13Q86X67 352 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 ADGRF3Q8IZF5 1079 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 FAM26EQ8N5C1 309 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 TMEM163Q8TC26 289 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 TM4SF18Q96CE8 201 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 ZNF689Q96CS4 500 aaPredicted RBP7.71□□□□□ -1.18
CD46-208ENST00000367042 ARSGQ96EG1 525 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 DPCDQ9BVM2 203 aaPredicted RBP7.71□□□□□ -1.18
CD46-208ENST00000367042 SPATA5L1Q9BVQ7 753 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 CHIAQ9BZP6 476 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 CLEC4MQ9H2X3 399 aaPredicted RBP7.71□□□□□ -1.18
CD46-208ENST00000367042 XKR8Q9H6D3 395 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 MED20Q9H944 212 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 IL21Q9HBE4 155 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 TDP1Q9NUW8 608 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 EIF3KQ9UBQ5 218 aaKnown RBP7.71□□□□□ -1.18
CD46-208ENST00000367042 KLHL21Q9UJP4 597 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 KCND3Q9UK17 655 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 PRELID1Q9Y255 219 aa7.71□□□□□ -1.18
CD46-208ENST00000367042 EXOSC1Q9Y3B2 195 aaKnown RBP7.71□□□□□ -1.18
CD46-208ENST00000367042 ARID1BQ8NFD5 2236 aaPredicted RBP7.71□□□□□ -1.18
CD46-208ENST00000367042 A0A087WUU8 490 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 E9PQ18 207 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 NPC1O15118 1278 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 CHST10O43529 356 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 REM1O75628 298 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 HMGN2P05204 90 aaKnown RBP7.7□□□□□ -1.18
CD46-208ENST00000367042 ACADMP11310 421 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 ELK1P19419 428 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 HLA-DMAP28067 261 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 ACVR1BP36896 505 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 TM4SF4P48230 202 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 PDE7AQ13946 482 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 SF3A2Q15428 464 aaKnown RBP7.7□□□□□ -1.18
CD46-208ENST00000367042 NTRK2Q16620 822 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 C3orf38Q5JPI3 329 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 NDUFAF5Q5TEU4 345 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 SIGIRRQ6IA17 410 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 CDC73Q6P1J9 531 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 QSOX2Q6ZRP7 698 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 VRK2Q86Y07 508 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 SLC38A6Q8IZM9 456 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 ZNF614Q8N883 585 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 AMER3Q8N944 861 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 PIGXQ8TBF5 258 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 ZFPM2Q8WW38 1151 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 RFKQ969G6 155 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 RFT1Q96AA3 541 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 C16orf58Q96GQ5 468 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 MED30Q96HR3 178 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 PAK6Q9NQU5 681 aaPredicted RBP7.7□□□□□ -1.18
CD46-208ENST00000367042 KLHL28Q9NXS3 571 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 MRPL15Q9P015 296 aaKnown RBP7.7□□□□□ -1.18
CD46-208ENST00000367042 ENTPD4Q9Y227 616 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 DSPPQ9NZW4 1301 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 NRG2O14511 850 aaPredicted RBP7.7□□□□□ -1.18
CD46-208ENST00000367042 SOCS6O14544 535 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 TMPRSS11DO60235 418 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 CTSLP07711 333 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 CD3GP09693 182 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 DRD5P21918 477 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 DSG2Q14126 1118 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 ZNF628Q5EBL2 1059 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 FCRLBQ6BAA4 426 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 PLBD1Q6P4A8 553 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 CPOQ8IVL8 374 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 NRMQ8IXM6 262 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 REM2Q8IYK8 340 aaPredicted RBP7.7□□□□□ -1.18
CD46-208ENST00000367042 SMAP2Q8WU79 429 aaPredicted RBP7.7□□□□□ -1.18
CD46-208ENST00000367042 ING5Q8WYH8 240 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 HYLS1Q96M11 299 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 ATF6BQ99941 703 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 THAP7Q9BT49 309 aaPredicted RBP7.7□□□□□ -1.18
CD46-208ENST00000367042 TMEM43Q9BTV4 400 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 DPH7Q9BTV6 452 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 IMP3Q9NV31 184 aaKnown RBP7.7□□□□□ -1.18
CD46-208ENST00000367042 IRAK3Q9Y616 596 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 IRGMA1A4Y4 181 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 ARRDC5A6NEK1 342 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 PROM1O43490 865 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 B4GALT2O60909 372 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 SERPINI2O75830 405 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 UBXN7O94888 489 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 LIMS3P0CW19 117 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 LIMS4P0CW20 117 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 POU3F3P20264 500 aaPredicted RBP7.7□□□□□ -1.18
CD46-208ENST00000367042 ENDOUP21128 410 aaKnown RBP7.7□□□□□ -1.18
CD46-208ENST00000367042 GSTM3P21266 225 aa7.7□□□□□ -1.18
CD46-208ENST00000367042 STOMP27105 288 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms