RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 KIAA1143Q96AT1 154 aaPredicted RBP12.78□□□□□ -0.36
PRKN-205ENST00000366897 ZNF607Q96SK3 696 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 ARHGAP9Q9BRR9 750 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 GTPBP2Q9BX10 602 aaKnown RBP12.78□□□□□ -0.36
PRKN-205ENST00000366897 ISG20L2Q9H9L3 353 aaKnown RBP12.78□□□□□ -0.36
PRKN-205ENST00000366897 NUDT15Q9NV35 164 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 MGAT4AQ9UM21 535 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 PCYT1BQ9Y5K3 369 aaPredicted RBP12.78□□□□□ -0.36
PRKN-205ENST00000366897 CSNK1G3Q9Y6M4 447 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 A0A087WUU8 490 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 LOC105369274A0A096LPK9 316 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 A0A1W2PS29 197 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 CPSF4LA6NMK7 179 aaKnown RBP12.78□□□□□ -0.36
PRKN-205ENST00000366897 LEFTY2O00292 366 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 BTN3A3O00478 584 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 STK25O00506 426 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 PITPNM1O00562 1244 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 PROM1O43490 865 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 MMP20O60882 483 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 GNSP15586 552 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 ZNF30P17039 623 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 DDCP20711 480 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 RPL3P39023 403 aaKnown RBP12.78□□□□□ -0.36
PRKN-205ENST00000366897 ZDHHC20Q5W0Z9 365 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 TIGD3Q6B0B8 471 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 CREB3L2Q70SY1 520 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 OR4N4Q8N0Y3 316 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 TBC1D19Q8N5T2 526 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 TRAM1L1Q8N609 369 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 ANKRD53Q8N9V6 530 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 BEST4Q8NFU0 473 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 OR5AR1Q8NGP9 310 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 TEX47Q8TBZ9 253 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 DACT3Q96B18 629 aaPredicted RBP12.78□□□□□ -0.36
PRKN-205ENST00000366897 MED18Q9BUE0 208 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 CPEB1Q9BZB8 566 aaKnown RBP12.78□□□□□ -0.36
PRKN-205ENST00000366897 EVA1BQ9NVM1 165 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 TAC3Q9UHF0 121 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 PCDHGB7Q9Y5F8 929 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 KCNE3Q9Y6H6 103 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 EEF1E1O43324 174 aaKnown RBP12.77□□□□□ -0.36
PRKN-205ENST00000366897 LATS1O95835 1130 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 ELFN1P0C7U0 828 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 CXCL3P19876 107 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 BMP8BP34820 402 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 ZNF155Q12901 538 aaPredicted RBP12.77□□□□□ -0.36
PRKN-205ENST00000366897 ESCO2Q56NI9 601 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 RAET1GQ6H3X3 334 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 SLC27A4Q6P1M0 643 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 SLC36A4Q6YBV0 504 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 LIX1LQ8IVB5 337 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 FAM20CQ8IXL6 584 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 VN1R2Q8NFZ6 395 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 ANGPTL6Q8NI99 470 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 OR5P2Q8WZ92 322 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 ZSCAN5AQ9BUG6 496 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 SGPP1Q9BX95 441 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 ABCG5Q9H222 651 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 ELAC1Q9H777 363 aaKnown RBP12.77□□□□□ -0.36
PRKN-205ENST00000366897 EQTNQ9NQ60 294 aa12.77□□□□□ -0.36
PRKN-205ENST00000366897 ZCCHC3Q9NUD5 404 aaKnown RBP12.77□□□□□ -0.36
PRKN-205ENST00000366897 GPR55Q9Y2T6 319 aaPredicted RBP12.77□□□□□ -0.36
PRKN-205ENST00000366897 A0A1W2PRQ8 180 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 TMEM129A0AVI4 362 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 FAM170BA6NMN3 283 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 SOCS6O14544 535 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 KIAA0355O15063 1070 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 CHP2O43745 196 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 SLC43A1O75387 559 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 OLFM2O95897 454 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 HLA-DQB1P01920 261 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 CHRM4P08173 479 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 GPR4P46093 362 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 OR10A3P58181 314 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 RAB40BQ12829 278 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 LASP1Q14847 261 aaKnown RBP12.77□□□□□ -0.37
PRKN-205ENST00000366897 SF3A2Q15428 464 aaKnown RBP12.77□□□□□ -0.37
PRKN-205ENST00000366897 VASNQ6EMK4 673 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 TMEM91Q6ZNR0 172 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 FAM92BQ6ZTR7 304 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 OR11H7Q8NGC8 314 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 SMAP2Q8WU79 429 aaPredicted RBP12.77□□□□□ -0.37
PRKN-205ENST00000366897 ARSGQ96EG1 525 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 MS4A3Q96HJ5 214 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 LMLNQ96KR4 655 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 SECISBP2Q96T21 854 aaKnown RBP12.77□□□□□ -0.37
PRKN-205ENST00000366897 DHRS9Q9BPW9 319 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 SPG21Q9NZD8 308 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 ACAD8Q9UKU7 415 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 TBX21Q9UL17 535 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 ASF1AQ9Y294 204 aa12.77□□□□□ -0.37
PRKN-205ENST00000366897 SIRT4Q9Y6E7 314 aaPredicted RBP12.77□□□□□ -0.37
PRKN-205ENST00000366897 TRDV1A0A1B0GX56 115 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 A8MUA0 341 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 H7BY64 318 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 ERAL1O75616 437 aaKnown RBP12.76□□□□□ -0.37
PRKN-205ENST00000366897 EIF4EP06730 217 aaKnown RBP12.76□□□□□ -0.37
PRKN-205ENST00000366897 C8orf89P0DMQ9 161 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 TRIM23P36406 574 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 RNF144AP50876 292 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms