RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ADAMTS19Q8TE59 1207 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 C15orf40Q8WUR7 153 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 GATAD2BQ8WXI9 593 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 OR5B2Q96R09 309 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 PBX4Q9BYU1 374 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 SNU13P55769 128 aaKnown RBP17.57■□□□□ 0.4
CLIP2-202ENST00000361545 ACTC1P68032 377 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 ACTA1P68133 377 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 SLC14A2Q15849 920 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 UEVLDQ8IX04 471 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 DEFB123Q8N688 67 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 OR52R1Q8NGF1 315 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 MGAT4AQ9UM21 535 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 hCG_1807616A0A1W2PRN6 198 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 CDC14CA4D256 554 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 MROH6A6NGR9 719 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 SEMA3DO95025 777 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 OXSR1O95747 527 aaPredicted RBP17.57■□□□□ 0.4
CLIP2-202ENST00000361545 IFNA21P01568 189 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 ADRA1AP35348 466 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 TLE3Q04726 772 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 EEF1A2Q05639 463 aaKnown RBP17.57■□□□□ 0.4
CLIP2-202ENST00000361545 HSD17B12Q53GQ0 312 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 OR51L1Q8NGJ5 315 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 TXLNGYQ9BZA5 131 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 ERVK-18Q9QC07 812 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 TAF1P21675 1872 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 TEX46H3BTG2 121 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 IST1P53990 364 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 GXYLT1Q4G148 440 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 PRAMEF8Q5VWM4 474 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 PRAMEF7Q5VXH5 474 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 CEACAM19Q7Z692 300 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 HDAC2Q92769 488 aaKnown RBP17.57■□□□□ 0.4
CLIP2-202ENST00000361545 SCGB3A2Q96PL1 93 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 EIF3KQ9UBQ5 218 aaKnown RBP17.57■□□□□ 0.4
CLIP2-202ENST00000361545 SLC7A7Q9UM01 511 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 EFCAB7A8K855 629 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 CCRL2O00421 344 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 GKN3PP0CG01 181 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 COQ5Q5HYK3 327 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 FCRLBQ6BAA4 426 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 HMBOX1Q6NT76 420 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 PLBD1Q6P4A8 553 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 TMEM184AQ6ZMB5 413 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 TRIM43Q96BQ3 446 aaPredicted RBP17.57■□□□□ 0.4
CLIP2-202ENST00000361545 TAMM41Q96BW9 452 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 WASF3Q9UPY6 502 aa17.57■□□□□ 0.4
CLIP2-202ENST00000361545 SLC22A31A6NKX4 558 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 PENKP01210 267 aaPredicted RBP17.56■□□□□ 0.4
CLIP2-202ENST00000361545 OPN1LWP04000 364 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 CTHP32929 405 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 DPP6P42658 865 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 YPEL5P62699 121 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 KLBQ86Z14 1044 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 LIX1LQ8IVB5 337 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 NEIL3Q8TAT5 605 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 WFDC5Q8TCV5 224 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 THRSPQ92748 146 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 ADOQ96SZ5 270 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 RBM24Q9BX46 236 aaKnown RBP17.56■□□□□ 0.4
CLIP2-202ENST00000361545 AASSQ9UDR5 926 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 ITGB4P16144 1822 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 TRBV2A0A0J9YWF9 115 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 TEX13CA0A0J9YWL9 993 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 RIDAP52758 137 aaKnown RBP17.56■□□□□ 0.4
CLIP2-202ENST00000361545 HERV-K104P61576 105 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 TMEM174Q8WUU8 243 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 TAS2R10Q9NYW0 307 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 SEC14L4Q9UDX3 406 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 SH3BGRL2Q9UJC5 107 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 H0YAE9 185 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 ITIH1P19827 911 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 POU3F4P49335 361 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 MALLQ13021 153 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 TRIM61Q5EBN2 209 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 ZNF534Q76KX8 674 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 STX12Q86Y82 276 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 IQCF1Q8N6M8 205 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 CDS1Q92903 461 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 SLC7A6OSQ96CW6 309 aaPredicted RBP17.56■□□□□ 0.4
CLIP2-202ENST00000361545 FUZQ9BT04 418 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 NTMT1Q9BV86 223 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 DPH1Q9BZG8 443 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 ULBP3Q9BZM4 244 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 SLC6A16Q9GZN6 736 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 POT1Q9NUX5 634 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 THAP10Q9P2Z0 257 aaPredicted RBP17.56■□□□□ 0.4
CLIP2-202ENST00000361545 PCP4L1A6NKN8 68 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 GABRR3A8MPY1 467 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 AFF3P51826 1226 aaKnown RBP17.56■□□□□ 0.4
CLIP2-202ENST00000361545 MAP4K2Q12851 820 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 C6orf141Q5SZD1 244 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 RSPO2Q6UXX9 243 aaPredicted RBP17.56■□□□□ 0.4
CLIP2-202ENST00000361545 LRRC69Q6ZNQ3 347 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 ZFP41Q8N8Y5 198 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 CNN2Q99439 309 aaKnown RBP17.56■□□□□ 0.4
CLIP2-202ENST00000361545 MAGIXQ9H6Y5 334 aa17.56■□□□□ 0.4
CLIP2-202ENST00000361545 NUMA1Q14980 2115 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 MYH4Q9Y623 1939 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms