RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 VN1R4Q7Z5H5 301 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 OOSP2Q86WS3 158 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 MFSD4AQ8N468 514 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 WDR12Q9GZL7 423 aaKnown RBP13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 GLIPR2Q9H4G4 154 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 PARD6AQ9NPB6 346 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 THSD1Q9NS62 852 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 PCDHGB3Q9Y5G1 929 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 URADA6NGE7 173 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 C2orf74A8MZ97 194 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 SLC16A6O15403 523 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 PRAMEF10O60809 474 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 SLC35G6P0C7Q6 338 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 GLB1P16278 677 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 LSSP48449 732 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 CTAG1AP78358 180 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 FIGLAQ6QHK4 219 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 TMEM64Q6YI46 380 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 P2RY8Q86VZ1 359 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 ARMC8Q8IUR7 673 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 HORMAD2Q8N7B1 307 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 DTX3Q8N9I9 347 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 AVL9Q8NBF6 648 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 CCDC74AQ96AQ1 378 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 BBS4Q96RK4 519 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 EDEM2Q9BV94 578 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 TMEM121BQ9BXQ6 578 aaPredicted RBP13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 EVA1BQ9NVM1 165 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 NAALAD2Q9Y3Q0 740 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 SAMHD1Q9Y3Z3 626 aaKnown RBP13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 ATG4BQ9Y4P1 393 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 RIF1Q5UIP0 2472 aaKnown RBP13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 LILRA5A6NI73 299 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 ADAMDEC1O15204 470 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 PROM1O43490 865 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 C9P02748 559 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 STATHP02808 62 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 PROS1P07225 676 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 ITGAMP11215 1152 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 MAGP20916 626 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 DAPP51397 102 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 COL9A2Q14055 689 aaPredicted RBP13□□□□□ -0.33
CSNK1E-201ENST00000359867 KDM4DQ6B0I6 523 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 SLC48A1Q6P1K1 146 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 SLC22A16Q86VW1 577 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF540Q8NDQ6 660 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 SPPL2AQ8TCT8 520 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 SFXN5Q8TD22 340 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 UCN3Q969E3 161 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 TP53INP1Q96A56 240 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 MOAP1Q96BY2 351 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 OR2A5Q96R48 311 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 SYNPO2LQ9H987 977 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 SEMA3GQ9NS98 782 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 CES1P1Q9UKY3 287 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 C5orf58C9J3I9 102 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 LCKP06239 509 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 CERS1P27544 350 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 GPC1P35052 558 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 CAPZBP47756 277 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 GFERP55789 205 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 RAB8AP61006 207 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 SLC13A2Q13183 592 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 NR0B2Q15466 257 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 FCRL6Q6DN72 434 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 BHLHB9Q6PI77 547 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 LSMEM1Q8N8F7 131 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 GEMIN6Q8WXD5 167 aaKnown RBP13□□□□□ -0.33
CSNK1E-201ENST00000359867 PHOX2BQ99453 314 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 RUBCNLQ9H714 662 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 PILRAQ9UKJ1 303 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 FBXW2Q9UKT8 454 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 GMPPBQ9Y5P6 360 aa13□□□□□ -0.33
CSNK1E-201ENST00000359867 SH3BP5O60239 455 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 FAM20BO75063 409 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 PDE9AO76083 593 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 AIFM1O95831 613 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 SMIM10L1P0DMW3 83 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 TGM1P22735 817 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 NBL1P41271 181 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 ANXA11P50995 505 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 NCBP2P52298 156 aaKnown RBP eCLIP12.99□□□□□ -0.334e-8■■□□□ 13.3
CSNK1E-201ENST00000359867 BTN3A2P78410 334 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 CHRNEQ04844 493 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 SUZ12Q15022 739 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 CEBPEQ15744 281 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 DGUOKQ16854 277 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 ARMC6Q6NXE6 501 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 FAM92BQ6ZTR7 304 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 USP53Q70EK8 1073 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 CAMKVQ8NCB2 501 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 PIK3C3Q8NEB9 887 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 UTP15Q8TED0 518 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 SMIM10Q96HG1 83 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 FCRL4Q96PJ5 515 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 UCK1Q9HA47 277 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 PRDM9Q9NQV7 894 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 GIMAP4Q9NUV9 329 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 NDUFAF4Q9P032 175 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms