RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PRAMEF2O60811 474 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 GCM2O75603 506 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 SERPINB7O75635 380 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 SOX30O94993 753 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 PGM3O95394 542 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 CBX7O95931 251 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 ONECUT2O95948 504 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 MT-ND1P03886 318 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 SEMG1P04279 462 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 ACP2P11117 423 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 ETS2P15036 469 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 TNNI3P19429 210 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 AGXTP21549 392 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 CRYBA2P53672 197 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 SELENOWP63302 87 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 RHAGQ02094 409 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 OCA2Q04671 838 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 ZNF267Q14586 743 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 EXOSC7Q15024 291 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 ZNHIT3Q15649 155 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 SYPL1Q16563 259 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 LRRC36Q1X8D7 754 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 GPAT3Q53EU6 434 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 IFI44LQ53G44 452 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 DGAT2L6Q6ZPD8 337 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 RAB11FIP2Q7L804 512 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 ZDHHC21Q8IVQ6 265 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 CACTIN-AS1Q8N1I8 211 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 ANKFN1Q8N957 763 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 DOK4Q8TEW6 326 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 RASSF5Q8WWW0 418 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 SLC9A6Q92581 669 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 STACQ99469 402 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 ZPBPQ9BS86 351 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 DOHHQ9BU89 302 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 CNPPD1Q9BV87 410 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 SPATA5L1Q9BVQ7 753 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 BTBD2Q9BX70 525 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 TGIF2Q9GZN2 237 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 PIGUQ9H490 435 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 BCL2L10Q9HD36 194 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 DUSP22Q9NRW4 184 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 ZNF639Q9UID6 485 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 BAG5Q9UL15 447 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 LOXL2Q9Y4K0 774 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 PCDHGB3Q9Y5G1 929 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 SEC16AO15027 2179 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 A0A0G2JPF8 293 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 TTC36A6NLP5 189 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 HNRNPCL2B2RXH8 293 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 HNRNPCL3B7ZW38 293 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 CLOCKO15516 846 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 AK1P00568 194 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 FABP3P05413 133 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 JMJD7P0C870 316 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 HNRNPCL4P0DMR1 293 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 RORAP35398 523 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 MAGEA2P43356 314 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 FUT5Q11128 374 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 MAPK11Q15759 364 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 DUSP5Q16690 384 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 VWA2Q5GFL6 755 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 EXOSC6Q5RKV6 272 aaKnown RBP12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 ZNF385CQ66K41 422 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 HEPHL1Q6MZM0 1159 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 IZUMO2Q6UXV1 221 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 VTCN1Q7Z7D3 282 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 SLCO6A1Q86UG4 719 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 ARMC8Q8IUR7 673 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 SLC38A9Q8NBW4 561 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 ICA1LQ8NDH6 482 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 PLPP5Q8NEB5 264 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 OR52R1Q8NGF1 315 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 GEMIN6Q8WXD5 167 aaKnown RBP12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 CDS1Q92903 461 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 TSLPQ969D9 159 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 EME1Q96AY2 570 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 FKBP10Q96AY3 582 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 SLC35A4Q96G79 324 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 VPS50Q96JG6 964 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 ART5Q96L15 291 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 COL21A1Q96P44 957 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 TRNT1Q96Q11 434 aaKnown RBP12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 CTRCQ99895 268 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 TREX2Q9BQ50 279 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 TRIM45Q9H8W5 580 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 CACYBPQ9HB71 228 aaKnown RBP12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 SLC39A1Q9NY26 324 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 DNAJB9Q9UBS3 223 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 CTSFQ9UBX1 484 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 SATB2Q9UPW6 733 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 ERVK-19Q9WJR5 959 aa12.89□□□□□ -0.35
PDLIM5-203ENST00000359265 A0A087WV48 116 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 TCRBV16S1A1N1A0A5B0 115 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 PRAMEF27A3QJZ7 478 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 FAM149AA5PLN7 773 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 OR2W5A6NFC9 320 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 A8MVJ9 347 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 C17orf105B2RV13 164 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 GNGT2O14610 69 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms