RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 A0A0G2JMP0 313 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 HMGN2P05204 90 aaKnown RBP11.87□□□□□ -0.51
GGPS1-202ENST00000358966 NR2F6P10588 404 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 CPN2P22792 545 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 NTSP30990 170 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 RNF144AP50876 292 aaPredicted RBP11.87□□□□□ -0.51
GGPS1-202ENST00000358966 ALDH3A2P51648 485 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 LIM2P55344 173 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 SHC2P98077 582 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 KCNAB1Q14722 419 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 ELOCQ15369 112 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 OR2T5Q6IEZ7 315 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 FAM111BQ6SJ93 734 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 KCTD8Q6ZWB6 473 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 CYP4Z1Q86W10 505 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 RBM45Q8IUH3 476 aaKnown RBP11.87□□□□□ -0.51
GGPS1-202ENST00000358966 CSNK1A1LQ8N752 337 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 OR10Z1Q8NGY1 313 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 OR2T29Q8NH02 315 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 MAFAQ8NHW3 353 aaPredicted RBP11.87□□□□□ -0.51
GGPS1-202ENST00000358966 PIK3R3Q92569 461 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 TGM7Q96PF1 710 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 CCDC3Q9BQI4 270 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 TOR4AQ9NXH8 423 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 RPS6KA6Q9UK32 745 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 RECKO95980 971 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 ARAFP10398 606 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 ELK4P28324 431 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 HTR2BP41595 481 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 FNTBP49356 437 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 POLR2GP62487 172 aaKnown RBP eCLIP11.87□□□□□ -0.51
GGPS1-202ENST00000358966 FADDQ13158 208 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 EID3Q8N140 333 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 DHRSXQ8N5I4 330 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 OR9A4Q8NGU2 314 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 SLC38A3Q99624 504 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 DOHHQ9BU89 302 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 MAGIXQ9H6Y5 334 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 CPNE5Q9HCH3 593 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 IL20Q9NYY1 176 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 NDUFAF4Q9P032 175 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 KCMF1Q9P0J7 381 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 POMT2Q9UKY4 750 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 PSME2Q9UL46 239 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 ENTPD4Q9Y227 616 aa11.87□□□□□ -0.51
GGPS1-202ENST00000358966 ASPMQ8IZT6 3477 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 TOR1BO14657 336 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 RDH16O75452 317 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 KCNK2O95069 426 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 THRBP10828 461 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 DRD2P14416 443 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 AP2S1P53680 142 aaPredicted RBP11.86□□□□□ -0.51
GGPS1-202ENST00000358966 NXPH1P58417 271 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 SELENOWP63302 87 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 FUT5Q11128 374 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 SYT16Q17RD7 645 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 FAM214AQ32MH5 1076 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 ARMC6Q6NXE6 501 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 GALNT12Q8IXK2 581 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 GRPEL2Q8TAA5 225 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 CLDN23Q96B33 292 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 C10orf90Q96M02 699 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 MBOAT4Q96T53 435 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 TWSG1Q9GZX9 223 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 TMEFF2Q9UIK5 374 aaPredicted RBP11.86□□□□□ -0.51
GGPS1-202ENST00000358966 ZNF221Q9UK13 617 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 DAPP1Q9UN19 280 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 PCDHGA10Q9Y5H3 936 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 SLC28A2O43868 658 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 ALBP02768 609 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 ALOX12P18054 663 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 MAT1AQ00266 395 aaKnown RBP11.86□□□□□ -0.51
GGPS1-202ENST00000358966 KCNAB2Q13303 367 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 ERV3-1Q14264 604 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 TEAD4Q15561 434 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 AMZ1Q400G9 498 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 PRAMEF17Q5VTA0 474 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 GATAD2AQ86YP4 633 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 PACRGLQ8N7B6 248 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 VANGL1Q8TAA9 524 aaPredicted RBP11.86□□□□□ -0.51
GGPS1-202ENST00000358966 ZG16BQ96DA0 208 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 ARSGQ96EG1 525 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 SLC35G5Q96KT7 338 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 SPACA7Q96KW9 195 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 ZNF681Q96N22 645 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 TMEM38AQ9H6F2 299 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 CTPS2Q9NRF8 586 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 DCAF16Q9NXF7 216 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 PDP1Q9P0J1 537 aaPredicted RBP11.86□□□□□ -0.51
GGPS1-202ENST00000358966 HCN4Q9Y3Q4 1203 aa11.86□□□□□ -0.51
GGPS1-202ENST00000358966 IGHV5-51A0A0C4DH38 117 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 SEMA7AO75326 666 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 IL7RP16871 459 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 CAPGP40121 348 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 SEPHS1P49903 392 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 DAPP51397 102 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 TMBIM6P55061 237 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 PCBP3P57721 371 aaKnown RBP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 CDC20Q12834 499 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 Q6ZPB1 254 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms