RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ZFPM2Q8WW38 1151 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ZNF689Q96CS4 500 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 CXorf40BQ96DE9 158 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 CLIP3Q96DZ5 547 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SIPA1Q96FS4 1042 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 DEFB118Q96PH6 123 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SGIP1Q9BQI5 828 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 KCNN2Q9H2S1 579 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 MIXL1Q9H2W2 232 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 TMEM38AQ9H6F2 299 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 TDP1Q9NUW8 608 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 NDUFB11Q9NX14 153 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 NPAP1Q9NZP6 1156 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SRRDQ9UH36 339 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 EXOSC1Q9Y3B2 195 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ASCC3Q8N3C0 2202 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 IRGMA1A4Y4 181 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 A8MUA0 341 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 WASH3PC4AMC7 463 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ZNF780AO75290 641 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 KHDRBS3O75525 346 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 IGHA2P01877 340 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ACRP10323 421 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 GSTM3P21266 225 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 PRPH2P23942 346 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SHC1P29353 583 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 EVI2BP34910 448 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ETV6P41212 452 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 CENPAP49450 140 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 METAP1P53582 386 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 STXBP1P61764 594 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ASAH1Q13510 395 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ASTLQ6HA08 431 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 FGD2Q7Z6J4 655 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 TECPR1Q7Z6L1 1165 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SYT9Q86SS6 491 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 FAM109AQ8N4B1 249 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 KCT2Q8NC54 265 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 BBS1Q8NFJ9 593 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 OR4D11Q8NGI4 311 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 BTBD1Q9H0C5 482 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SLC28A3Q9HAS3 691 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SLAMF7Q9NQ25 335 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 PAK6Q9NQU5 681 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 TM7SF3Q9NS93 570 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 CDV3Q9UKY7 258 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 RASD1Q9Y272 281 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 BACE2Q9Y5Z0 518 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 KIAA0100Q14667 2235 aaKnown RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 SCN3AQ9NY46 2000 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 MID1O15344 667 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 NUPL2O15504 423 aaKnown RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 TGM5O43548 720 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 RPN2P04844 631 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 LAMP2P13473 410 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 GIFP27352 417 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 MAT2AP31153 395 aaKnown RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PYCR1P32322 319 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 SLC1A3P43003 542 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 SLC6A11P48066 632 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 RRAS2P62070 204 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 ST3GAL3Q11203 375 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 IRF5Q13568 498 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 TRAM2Q15035 370 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 ZMYND11Q15326 602 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PARS2Q7L3T8 475 aaKnown RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PRICKLE2Q7Z3G6 844 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PGBD3Q8N328 593 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 TBC1D19Q8N5T2 526 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 FAM98AQ8NCA5 519 aaKnown RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 THAP7Q9BT49 309 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 CACNG6Q9BXT2 260 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 DPH1Q9BZG8 443 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 DPAGT1Q9H3H5 408 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 NANSQ9NR45 359 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 RDH8Q9NYR8 311 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 KLHL42Q9P2K6 505 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 EXO1Q9UQ84 846 aaKnown RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 NPIPA5A0A0B4J1W7 369 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 TEX13CA0A0J9YWL9 993 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 ZNF860A6NHJ4 632 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 NPIPA7E9PJI5 369 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 HMGN4O00479 90 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PLA2G10O15496 165 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 HCN1O60741 890 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 SEMG1P04279 462 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 NPIPA8P0DM63 369 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 ACP2P11117 423 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PEPDP12955 493 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 GABRB1P18505 474 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PRKACBP22694 351 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 DNASE1P24855 282 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PTGS2P35354 604 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 RPL4P36578 427 aaKnown RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 KCNJ5P48544 419 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 AP2S1P53680 142 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 VSX2P58304 361 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PRR5P85299 388 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 GNA13Q14344 377 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms