RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PGAP3Q96FM1 320 aaPredicted RBP17.1■□□□□ 0.33
COL18A1-202ENST00000355480 TOE1Q96GM8 510 aaKnown RBP17.1■□□□□ 0.33
COL18A1-202ENST00000355480 PHOX2BQ99453 314 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 RP2O75695 350 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 EMP2P54851 167 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 TMBIM6P55061 237 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 DEFB103AP81534 67 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 RAB11BQ15907 218 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 TRIM46Q7Z4K8 759 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 OR6Q1Q8NGQ2 317 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 UBE2J1Q9Y385 318 aaPredicted RBP17.09■□□□□ 0.33
COL18A1-202ENST00000355480 M0R233 179 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 TMEM225BP0DP42 221 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 TUBG1P23258 451 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 CD68P34810 354 aaPredicted RBP17.09■□□□□ 0.33
COL18A1-202ENST00000355480 ZNF81P51508 661 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 CEACAM7Q14002 265 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 DUS1LQ6P1R4 473 aaKnown RBP17.09■□□□□ 0.33
COL18A1-202ENST00000355480 RANBP10Q6VN20 620 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 HACD2Q6Y1H2 254 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 HDHD5Q9BXW7 423 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 PAK1IP1Q9NWT1 392 aaPredicted RBP17.09■□□□□ 0.33
COL18A1-202ENST00000355480 RDH16O75452 317 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 RBM39Q14498 530 aaKnown RBP17.09■□□□□ 0.33
COL18A1-202ENST00000355480 OR9A2Q8NGT5 310 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 STARD5Q9NSY2 213 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 FAM118AQ9NWS6 357 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 A8MV72 311 aaPredicted RBP17.09■□□□□ 0.33
COL18A1-202ENST00000355480 SGK494L7N484 410 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 KIAA0513O60268 411 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 WNT7BP56706 349 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 ARG2P78540 354 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 C7orf34Q96L11 122 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 MYRFLQ96LU7 910 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 OR5B2Q96R09 309 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 GPR52Q9Y2T5 361 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 ST14Q9Y5Y6 855 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 FBP2O00757 339 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 SMAD6O43541 496 aaKnown RBP17.09■□□□□ 0.33
COL18A1-202ENST00000355480 PPP1R3DO95685 299 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 CDKN2CP42773 168 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 HNRNPA1L2Q32P51 320 aaKnown RBP17.09■□□□□ 0.33
COL18A1-202ENST00000355480 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.09■□□□□ 0.33
COL18A1-202ENST00000355480 KLHL15Q96M94 604 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 IGSF5Q9NSI5 407 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 C14orf119Q9NWQ9 140 aa17.09■□□□□ 0.33
COL18A1-202ENST00000355480 PTRH2Q9Y3E5 179 aaKnown RBP17.09■□□□□ 0.33
COL18A1-202ENST00000355480 A0A0A6YYC8 382 aaPredicted RBP17.08■□□□□ 0.33
COL18A1-202ENST00000355480 AGAP5A6NIR3 686 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 I3L1I5 382 aaPredicted RBP17.08■□□□□ 0.33
COL18A1-202ENST00000355480 MTNR1AP48039 350 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 CXCL12P48061 93 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 PITPNBP48739 271 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 NKX3-2P78367 333 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 AWAT2Q6E213 333 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 PDZD3Q86UT5 571 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 TMEM173Q86WV6 379 aaPredicted RBP17.08■□□□□ 0.33
COL18A1-202ENST00000355480 CIDECQ96AQ7 238 aaPredicted RBP17.08■□□□□ 0.33
COL18A1-202ENST00000355480 STUB1Q9UNE7 303 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 ADAP00813 363 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 IL4RP24394 825 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 MC3RP41968 323 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 FAM189BP81408 668 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 CDRT4Q8N9R6 151 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 TBC1D15Q8TC07 691 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 RHBDF1Q96CC6 855 aa17.08■□□□□ 0.33
COL18A1-202ENST00000355480 TIMM8BQ9Y5J9 83 aaPredicted RBP17.08■□□□□ 0.33
COL18A1-202ENST00000355480 ANKRD28O15084 1053 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 JRKO75564 520 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 ACTL6BO94805 426 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 GJA8P48165 433 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 MFSD13AQ14CX5 517 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 SHISA6Q6ZSJ9 500 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 TMIEQ8NEW7 156 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 OR2S2Q9NQN1 319 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 TNFRSF1BP20333 461 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 MAGEA3P43357 314 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 HSD11B1LQ7Z5J1 315 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 CBARPQ8N350 705 aaPredicted RBP17.08■□□□□ 0.32
COL18A1-202ENST00000355480 CASD1Q96PB1 797 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 C7P10643 843 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 RGNQ15493 299 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 CD200R1Q8TD46 325 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 VDAC3Q9Y277 283 aa17.08■□□□□ 0.32
COL18A1-202ENST00000355480 F5H0A9 414 aaPredicted RBP17.07■□□□□ 0.32
COL18A1-202ENST00000355480 ART1P52961 327 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 DPPA4Q7L190 304 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 SLC5A8Q8N695 610 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 FIZ1Q96SL8 496 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 IL17CQ9P0M4 197 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 SLC7A7Q9UM01 511 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 SNAPC5O75971 98 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 RAC2P15153 192 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 PTGS2P35354 604 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 SHFQ7M4L6 423 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 IGFN1Q86VF2 1251 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 NAGSQ8N159 534 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 OR7G3Q8NG95 312 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 FGF13Q92913 245 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 INPP5KQ9BT40 448 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms