RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ALDH4A1P30038 563 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 ZSWIM7Q19AV6 140 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 HLA-BQ31612 363 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 C16orf62Q7Z3J2 963 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 ARHGAP22Q7Z5H3 698 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 ZNF619Q8N2I2 560 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 OR7G1Q8NGA0 311 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 MAGED4Q96JG8 741 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 ALPK1Q96QP1 1244 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 FEVQ99581 238 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 YIPF4Q9BSR8 244 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 GMEB2Q9UKD1 530 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 AGAP5A6NIR3 686 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 CLIC3O95833 236 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 H1F0P07305 194 aaKnown RBP16.04■□□□□ 0.16
VPS13B-201ENST00000355155 PTGER1P34995 402 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 ALDH6A1Q02252 535 aaKnown RBP16.04■□□□□ 0.16
VPS13B-201ENST00000355155 CD47Q08722 323 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 DSG2Q14126 1118 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 ZBTB44Q8NCP5 570 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 OR4D9Q8NGE8 314 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 OR51Q1Q8NH59 317 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 TMEM221A6NGB7 291 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 M0R296 226 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 CLPSP04118 112 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 RORAP35398 523 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 ESRRGP62508 458 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 CSNK2BP67870 215 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 CTU2Q2VPK5 515 aaKnown RBP16.04■□□□□ 0.16
VPS13B-201ENST00000355155 EIPR1Q53HC9 387 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 DGAT2L6Q6ZPD8 337 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 GALNT12Q8IXK2 581 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 ZNF786Q8N393 782 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 ATG16L2Q8NAA4 619 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 OR1L3Q8NH93 324 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 NAT6Q93015 286 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 VSTM2LQ96N03 204 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 APOL4Q9BPW4 351 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 WFDC6Q9BQY6 131 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 MAN2C1Q9NTJ4 1040 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 KIF17Q9P2E2 1029 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 ZNF443Q9Y2A4 671 aaPredicted RBP16.04■□□□□ 0.16
VPS13B-201ENST00000355155 PCDH17O14917 1159 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 BRINP1O60477 761 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 FMO6PO60774 539 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 CPNE6O95741 557 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 GGT2P36268 569 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 EMDP50402 254 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 SRSF5Q13243 272 aaKnown RBP16.04■□□□□ 0.16
VPS13B-201ENST00000355155 CDK5R2Q13319 367 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 ZNF311Q5JNZ3 666 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 ZNF773Q6PK81 442 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 SZRD1Q7Z422 152 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 TMEM105Q8N8V8 129 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 ANKRA2Q9H9E1 313 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 PCDHGB1Q9Y5G3 927 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 PCDHGA10Q9Y5H3 936 aa16.04■□□□□ 0.16
VPS13B-201ENST00000355155 SH3PXD2BA1X283 911 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 HYAL3O43820 417 aaPredicted RBP16.03■□□□□ 0.16
VPS13B-201ENST00000355155 STX11O75558 287 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 DBIP07108 87 aaKnown RBP16.03■□□□□ 0.16
VPS13B-201ENST00000355155 DCST2Q5T1A1 773 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 SLC44A2Q8IWA5 706 aaPredicted RBP16.03■□□□□ 0.16
VPS13B-201ENST00000355155 OR52P1PQ8NH57 321 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 TUBA1CQ9BQE3 449 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 TMEM9Q9P0T7 183 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 HCN3Q9P1Z3 774 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 FTSJ1Q9UET6 329 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 OR2B3O76000 313 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 RAPSNQ13702 412 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 PROX2Q3B8N5 592 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 GRAMD2AQ8IUY3 354 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 MORN4Q8NDC4 146 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 SIMC1Q8NDZ2 872 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 OR6T1Q8NGN1 323 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 DIO2Q92813 273 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 COL26A1Q96A83 441 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 PEX11GQ96HA9 241 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 TGIF2Q9GZN2 237 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 FOLH1BQ9HBA9 442 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 PLCXD1Q9NUJ7 323 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 CLCA2Q9UQC9 943 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 WDR45Q9Y484 360 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 PCDHGA6Q9Y5G7 932 aa16.03■□□□□ 0.16
VPS13B-201ENST00000355155 COL27A1Q8IZC6 1860 aaPredicted RBP16.02■□□□□ 0.16
VPS13B-201ENST00000355155 ZNF883P0CG24 379 aa16.02■□□□□ 0.16
VPS13B-201ENST00000355155 TRHRP34981 398 aaPredicted RBP16.02■□□□□ 0.16
VPS13B-201ENST00000355155 POLR2IP36954 125 aaKnown RBP16.02■□□□□ 0.16
VPS13B-201ENST00000355155 LAPTM4AQ15012 233 aa16.02■□□□□ 0.16
VPS13B-201ENST00000355155 BMP8AQ7Z5Y6 402 aa16.02■□□□□ 0.16
VPS13B-201ENST00000355155 CCDC71Q8IV32 467 aaPredicted RBP16.02■□□□□ 0.16
VPS13B-201ENST00000355155 ZNF615Q8N8J6 731 aa16.02■□□□□ 0.16
VPS13B-201ENST00000355155 MMABQ96EY8 250 aaPredicted RBP16.02■□□□□ 0.16
VPS13B-201ENST00000355155 ALOXE3Q9BYJ1 711 aa16.02■□□□□ 0.16
VPS13B-201ENST00000355155 EQTNQ9NQ60 294 aa16.02■□□□□ 0.16
VPS13B-201ENST00000355155 REV1Q9UBZ9 1251 aa16.02■□□□□ 0.16
VPS13B-201ENST00000355155 HEMK1Q9Y5R4 338 aaPredicted RBP16.02■□□□□ 0.16
VPS13B-201ENST00000355155 MYOCOSA0A1B0GUC4 107 aa16.02■□□□□ 0.15
VPS13B-201ENST00000355155 TMEM150CB9EJG8 249 aa16.02■□□□□ 0.15
VPS13B-201ENST00000355155 CER1O95813 267 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms