RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 CLDN24A6NM45 220 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 A8MXK9 166 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 INSIG1O15503 277 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 GPR37L1O60883 481 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 STSP08842 583 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 ACPPP15309 386 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 OR1E1P30953 314 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 PTGER3P43115 390 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 IL2P60568 153 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 RPA4Q13156 261 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 KEAP1Q14145 624 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 PTPRNQ16849 979 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 ANKRD34AQ69YU3 496 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 RPUSD3Q6P087 351 aaKnown RBP10.24□□□□□ -0.77
SND1-201ENST00000354725 NLGN4YQ8NFZ3 816 aaPredicted RBP10.24□□□□□ -0.77
SND1-201ENST00000354725 OR4F6Q8NGB9 312 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 OR5K1Q8NHB7 308 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 NR4A3Q92570 626 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 RBP7Q96R05 134 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 MAP3K3Q99759 626 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 SMURF2Q9HAU4 748 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 SLC6A13Q9NSD5 602 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 C19orf53Q9UNZ5 99 aaPredicted RBP10.24□□□□□ -0.77
SND1-201ENST00000354725 LOC100130705A0A1B0GUX0 176 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 ANKDD1BA6NHY2 528 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 WASHC1A8K0Z3 465 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 SELENOFO60613 162 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 ERAL1O75616 437 aaKnown RBP10.24□□□□□ -0.77
SND1-201ENST00000354725 ATG12O94817 140 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 WDR47O94967 919 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 ADRB1P08588 477 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 TACR2P21452 398 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 RIPPLY1Q0D2K3 151 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 GPR19Q15760 415 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 RBMS3Q6XE24 437 aaKnown RBP10.24□□□□□ -0.77
SND1-201ENST00000354725 NUDT18Q6ZVK8 323 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 CHMP1BQ7LBR1 199 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 OR2T12Q8NG77 320 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 ELP5Q8TE02 316 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 VOPP1Q96AW1 172 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 MTERF3Q96E29 417 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 FCRL1Q96LA6 429 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 DPH7Q9BTV6 452 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 ANKRD19PQ9H560 264 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 ABCB9Q9NP78 766 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 LATS2Q9NRM7 1088 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 LYARQ9NX58 379 aaKnown RBP10.24□□□□□ -0.77
SND1-201ENST00000354725 KIF25Q9UIL4 384 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 BTNL2Q9UIR0 455 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 PCDHGC4Q9Y5F7 938 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 PCDHGA6Q9Y5G7 932 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 PCDHGA5Q9Y5G8 931 aa10.24□□□□□ -0.77
SND1-201ENST00000354725 PRRC2BQ5JSZ5 2229 aaKnown RBP10.24□□□□□ -0.77
SND1-201ENST00000354725 TRBV5-4A0A0C4DH59 114 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 URADA6NGE7 173 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 VPS26AO75436 327 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 PIRTP0C851 137 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 PXNP49023 591 aaPredicted RBP10.23□□□□□ -0.77
SND1-201ENST00000354725 RAB4BP61018 213 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 CDK5R2Q13319 367 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 SYT16Q17RD7 645 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 OTUD3Q5T2D3 398 aaPredicted RBP10.23□□□□□ -0.77
SND1-201ENST00000354725 GLT6D1Q7Z4J2 308 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 FJX1Q86VR8 437 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 CDYL2Q8N8U2 506 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 ZNF461Q8TAF7 563 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 ADAMTS18Q8TE60 1221 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 SNX33Q8WV41 574 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 SUSD6Q92537 303 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 FCRL4Q96PJ5 515 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 CDK15Q96Q40 435 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 TREX2Q9BQ50 279 aaPredicted RBP10.23□□□□□ -0.77
SND1-201ENST00000354725 CLEC4MQ9H2X3 399 aaPredicted RBP10.23□□□□□ -0.77
SND1-201ENST00000354725 VNN3Q9NY84 501 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 CORO2BQ9UQ03 480 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 OARD1Q9Y530 152 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 HCFC2Q9Y5Z7 792 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 TUBAL3A6NHL2 446 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 H7C4K7 107 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 SOCS6O14544 535 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 PPM1DO15297 605 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 GMFGO60234 142 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 GNSP15586 552 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 EPCAMP16422 314 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 HOXA9P31269 272 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 CHRNB3Q05901 458 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 GTF2H2Q13888 395 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 QPRTQ15274 297 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 IRF4Q15306 451 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 TATDN3Q17R31 274 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 CPZQ66K79 652 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 GTF2H2CQ6P1K8 395 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 MCATQ8IVS2 390 aaKnown RBP10.23□□□□□ -0.77
SND1-201ENST00000354725 HS3ST5Q8IZT8 346 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 TMEM132CQ8N3T6 1108 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 TTC9BQ8N6N2 239 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 CPNE4Q96A23 557 aaPredicted RBP10.23□□□□□ -0.77
SND1-201ENST00000354725 ZNF514Q96K75 400 aaPredicted RBP10.23□□□□□ -0.77
SND1-201ENST00000354725 SLC30A2Q9BRI3 323 aa10.23□□□□□ -0.77
SND1-201ENST00000354725 TLR8Q9NR97 1041 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms