RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SLITRK4Q8IW52 837 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 KRT78Q8N1N4 520 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 NXPE1Q8N323 547 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF671Q8TAW3 534 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 ACOT12Q8WYK0 555 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 CHFRQ96EP1 664 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 FUBP3Q96I24 572 aaKnown RBP eCLIP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 ARHGAP9Q9BRR9 750 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 GINS4Q9BRT9 223 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 PELOQ9BRX2 385 aaKnown RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 ACTR10Q9NZ32 417 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 PDE4DIPQ5VU43 2346 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 TMEM129A0AVI4 362 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 MFSD2BA6NFX1 497 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 K7ERQ8 282 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 NDUFA2O43678 99 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 FZD6O60353 706 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 EFCAB14O75071 495 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 SPDEFO95238 335 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 LIMS3P0CW19 117 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 LIMS4P0CW20 117 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 CR2P20023 1033 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 PAICSP22234 425 aaKnown RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 TIA1P31483 386 aaKnown RBP eCLIP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 IRS1P35568 1242 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 SPAM1P38567 509 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 BUD31P41223 144 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 NSG1P42857 185 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 CSNK1DP48730 415 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 VEGFCP49767 419 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 SMIM11AP58511 58 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 FLI1Q01543 452 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 TUSC3Q13454 348 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 GGTA1PQ4G0N0 100 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 LRRC73Q5JTD7 316 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 ALG1LQ6GMV1 187 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF770Q6IQ21 691 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 PYHIN1Q6K0P9 492 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 RNF165Q6ZSG1 346 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 OLIG3Q7RTU3 272 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 TECPR1Q7Z6L1 1165 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 IFNL1Q8IU54 200 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 PDZD9Q8IXQ8 264 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 OR51G2Q8NGK0 314 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 XAGE5Q8WWM1 108 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 CLP1Q92989 425 aaKnown RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 LRRC46Q96FV0 321 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 TMEM19Q96HH6 336 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 TMEM168Q9H0V1 697 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 BRD9Q9H8M2 597 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 WBP1LQ9NX94 342 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 CFAP97Q9P2B7 532 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 RPS6KB2Q9UBS0 482 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 CD84Q9UIB8 345 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 EDARQ9UNE0 448 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 LIPT1Q9Y234 373 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 MTMR11A4FU01 709 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 ANXA2P2A6NMY6 339 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 PRSS44E7EML9 344 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF593O00488 134 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 CELF2O95319 508 aaKnown RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 WDPCPO95876 746 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 KLK1P06870 262 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 C8GP07360 202 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 C1SP09871 688 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 CD22P20273 847 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 MMP11P24347 488 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 LIMS1P48059 325 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 CDH4P55283 916 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 CNTN1Q12860 1018 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 HSPB3Q12988 150 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 SLC27A4Q6P1M0 643 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 LINGO2Q7L985 606 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 TSPAN33Q86UF1 283 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 LINC00469Q8N7U9 141 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 FBXO15Q8NCQ5 510 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 GPRC5AQ8NFJ5 357 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 FOXJ1Q92949 421 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 FCRL1Q96LA6 429 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 CYSLTR2Q9NS75 346 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 ZSCAN32Q9NX65 697 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 TNRC18O15417 2968 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 A0A0B4J203 849 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 FAM74A7A6NL05 159 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 ARPC1BO15143 372 aaKnown RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 GLAP06280 429 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 SULT1A3P0DMM9 295 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 SULT1A4P0DMN0 295 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 ARAFP10398 606 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 PCSK2P16519 638 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 RAB3BP20337 219 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 NFYAP23511 347 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 MANFP55145 182 aaKnown RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF763Q0D2J5 394 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 HTR4Q13639 388 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 FAM74A3Q4VXF1 159 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 ELP2Q6IA86 826 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 C11orf88Q6PI97 169 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 TFAP2EQ6VUC0 442 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 LMNTD1Q8N9Z9 388 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms