RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PPICP45877 212 aa25.09■■□□□ 1.61
SSBP4-202ENST00000348495 TRAP1Q12931 704 aaKnown RBP25.09■■□□□ 1.61
SSBP4-202ENST00000348495 HSDL2Q6YN16 418 aa25.09■■□□□ 1.61
SSBP4-202ENST00000348495 ZNF441Q8N8Z8 693 aa25.09■■□□□ 1.61
SSBP4-202ENST00000348495 M1APQ8TC57 530 aa25.09■■□□□ 1.61
SSBP4-202ENST00000348495 WWTR1Q9GZV5 400 aa25.09■■□□□ 1.61
SSBP4-202ENST00000348495 SNX13Q9Y5W8 968 aa25.09■■□□□ 1.61
SSBP4-202ENST00000348495 C2orf92A0A1B0GVN3 265 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 A8MVJ9 347 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 CLCN2P51788 898 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 RNF4P78317 190 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 SCARB2Q14108 478 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 BTBD16Q32M84 506 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 METTL25Q8N6Q8 603 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 C17orf47Q8NEP4 570 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 NFKBIDQ8NI38 313 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 GPR151Q8TDV0 419 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 VPS50Q96JG6 964 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 IP6K3Q96PC2 410 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 ZNF160Q9HCG1 818 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 MMP25Q9NPA2 562 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 EXD2Q9NVH0 621 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 ACTR3BQ9P1U1 418 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 LIPT1Q9Y234 373 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 PCDHGB3Q9Y5G1 929 aa25.08■■□□□ 1.61
SSBP4-202ENST00000348495 ARPC2O15144 300 aa25.07■■□□□ 1.6
SSBP4-202ENST00000348495 PRKNO60260 465 aaPredicted RBP25.07■■□□□ 1.6
SSBP4-202ENST00000348495 DRD5P21918 477 aa25.07■■□□□ 1.6
SSBP4-202ENST00000348495 DCAF7P61962 342 aa25.07■■□□□ 1.6
SSBP4-202ENST00000348495 SRSF6Q13247 344 aaKnown RBP25.07■■□□□ 1.6
SSBP4-202ENST00000348495 SYPL1Q16563 259 aa25.07■■□□□ 1.6
SSBP4-202ENST00000348495 ATAD3BQ5T9A4 648 aa25.07■■□□□ 1.6
SSBP4-202ENST00000348495 SLC29A4Q7RTT9 530 aa25.07■■□□□ 1.6
SSBP4-202ENST00000348495 ANKFN1Q8N957 763 aa25.07■■□□□ 1.6
SSBP4-202ENST00000348495 CHDHQ8NE62 594 aaPredicted RBP25.07■■□□□ 1.6
SSBP4-202ENST00000348495 WDR60Q8WVS4 1066 aa25.07■■□□□ 1.6
SSBP4-202ENST00000348495 PIK3R3Q92569 461 aa25.07■■□□□ 1.6
SSBP4-202ENST00000348495 TMEM19Q96HH6 336 aa25.07■■□□□ 1.6
SSBP4-202ENST00000348495 BTBD2Q9BX70 525 aa25.07■■□□□ 1.6
SSBP4-202ENST00000348495 MAGEL2Q9UJ55 1249 aa25.07■■□□□ 1.6
SSBP4-202ENST00000348495 ZNF451Q9Y4E5 1061 aa25.07■■□□□ 1.6
SSBP4-202ENST00000348495 TRBV11-1A0A0K0K1C0 115 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 CXCR6O00574 342 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 TLX3O43711 291 aaPredicted RBP25.06■■□□□ 1.6
SSBP4-202ENST00000348495 BCHEP06276 602 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 NCK1P16333 377 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 ARHGAP11BQ3KRB8 267 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 COX18Q8N8Q8 333 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 NUBPLQ8TB37 319 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 TRNT1Q96Q11 434 aaKnown RBP25.06■■□□□ 1.6
SSBP4-202ENST00000348495 NXF5Q9H1B4 397 aaKnown RBP25.06■■□□□ 1.6
SSBP4-202ENST00000348495 GXYLT2A0PJZ3 443 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 FRG2CA6NGY1 282 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 GCM2O75603 506 aaPredicted RBP25.06■■□□□ 1.6
SSBP4-202ENST00000348495 CIB2O75838 187 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 TRHRP34981 398 aaPredicted RBP25.06■■□□□ 1.6
SSBP4-202ENST00000348495 ATP1A4Q13733 1029 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 GLYATQ6IB77 296 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 LCN8Q6JVE9 175 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 REEP3Q6NUK4 255 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 SLC44A2Q8IWA5 706 aaPredicted RBP25.06■■□□□ 1.6
SSBP4-202ENST00000348495 SLC30A8Q8IWU4 369 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 HIPK4Q8NE63 616 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 OR4N2Q8NGD1 307 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 SNIP1Q8TAD8 396 aaKnown RBP25.06■■□□□ 1.6
SSBP4-202ENST00000348495 LCORQ96JN0 433 aaPredicted RBP25.06■■□□□ 1.6
SSBP4-202ENST00000348495 GAL3ST4Q96RP7 486 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 GORASP2Q9H8Y8 452 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 Q9N2J8 555 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 DKK4Q9UBT3 224 aa25.06■■□□□ 1.6
SSBP4-202ENST00000348495 TMEM200CA6NKL6 621 aa25.05■■□□□ 1.6
SSBP4-202ENST00000348495 GSTA4O15217 222 aa25.05■■□□□ 1.6
SSBP4-202ENST00000348495 CELA2AP08217 269 aa25.05■■□□□ 1.6
SSBP4-202ENST00000348495 NR2F1P10589 423 aa25.05■■□□□ 1.6
SSBP4-202ENST00000348495 PCBP3P57721 371 aaKnown RBP25.05■■□□□ 1.6
SSBP4-202ENST00000348495 C1orf146Q5VVC0 180 aa25.05■■□□□ 1.6
SSBP4-202ENST00000348495 C16orf62Q7Z3J2 963 aa25.05■■□□□ 1.6
SSBP4-202ENST00000348495 DHFR2Q86XF0 187 aa25.05■■□□□ 1.6
SSBP4-202ENST00000348495 PROSER1Q86XN7 944 aa25.05■■□□□ 1.6
SSBP4-202ENST00000348495 FIG4Q92562 907 aa25.05■■□□□ 1.6
SSBP4-202ENST00000348495 BCL2L10Q9HD36 194 aa25.05■■□□□ 1.6
SSBP4-202ENST00000348495 CEP295Q9C0D2 2601 aa25.05■■□□□ 1.6
SSBP4-202ENST00000348495 PEX12O00623 359 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 TO15178 435 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 SLC28A2O43868 658 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 ZFAND5O76080 213 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 AK1P00568 194 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 CHRM4P08173 479 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 ICAM2P13598 275 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 WT1P19544 449 aaPredicted RBP25.04■■□□□ 1.6
SSBP4-202ENST00000348495 ATP6V1B2P21281 511 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 POU6F2P78424 691 aaPredicted RBP25.04■■□□□ 1.6
SSBP4-202ENST00000348495 Q0VFX4 171 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 FLOT2Q14254 428 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 GNA13Q14344 377 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 NNATQ16517 81 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 DCST2Q5T1A1 773 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 PRAMEF8Q5VWM4 474 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 PRAMEF7Q5VXH5 474 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 AP1ARQ63HQ0 302 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms