RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 A6NCN8 305 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 RHCEP18577 417 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 SRP54P61011 504 aaKnown RBP20.01■□□□□ 0.79
PTPN18-202ENST00000347849 CRB2Q5IJ48 1285 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 NDUFAF5Q5TEU4 345 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 WDR53Q7Z5U6 358 aaPredicted RBP20.01■□□□□ 0.79
PTPN18-202ENST00000347849 HORMAD2Q8N7B1 307 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 SIMC1Q8NDZ2 872 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 KLHL6Q8WZ60 621 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 TMEM80Q96HE8 168 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 ABCB9Q9NP78 766 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 PRDM7Q9NQW5 492 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 SEC14L4Q9UDX3 406 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 COLEC10Q9Y6Z7 277 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 CDRT1O95170 752 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 SEMA4FO95754 770 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 IFNA14P01570 189 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 CSF2P04141 144 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 IGHV4-34P06331 123 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 Q5BKY6 102 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 PAQR6Q6TCH4 344 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 ZNF438Q7Z4V0 828 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 TMEM38AQ9H6F2 299 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 APOBEC3BQ9UH17 382 aaKnown RBP20.01■□□□□ 0.79
PTPN18-202ENST00000347849 KLF15Q9UIH9 416 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 ATG4BQ9Y4P1 393 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 LAMA1P25391 3075 aa20.01■□□□□ 0.79
PTPN18-202ENST00000347849 TRBV4-1A0A0J9YWV2 114 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 CCDC182A6NF36 153 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 LRRC72A6NJI9 287 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 ZNF670-ZNF695F2Z2N8 137 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 PGRMC2O15173 223 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 APBB3O95704 486 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 CELA2BP08218 269 aaPredicted RBP20■□□□□ 0.79
PTPN18-202ENST00000347849 HBQ1P09105 142 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 ALPPL2P10696 532 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 PIPP12273 146 aaPredicted RBP20■□□□□ 0.79
PTPN18-202ENST00000347849 PRKCAP17252 672 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 UQCRC2P22695 453 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 RPS26P11Q5JNZ5 115 aaPredicted RBP20■□□□□ 0.79
PTPN18-202ENST00000347849 LIPKQ5VXJ0 399 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 ZNF425Q6IV72 752 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 RAB8BQ92930 207 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 STUB1Q9UNE7 303 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 CYP8B1Q9UNU6 501 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 NINQ8N4C6 2090 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 FFAR1O14842 300 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 IFNW1P05000 195 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 ELOAQ14241 798 aaKnown RBP20■□□□□ 0.79
PTPN18-202ENST00000347849 LARS2Q15031 903 aaKnown RBP20■□□□□ 0.79
PTPN18-202ENST00000347849 ZNF770Q6IQ21 691 aaPredicted RBP20■□□□□ 0.79
PTPN18-202ENST00000347849 ABHD17CQ6PCB6 329 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 CHRDL2Q6WN34 429 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 GDPGP1Q6ZNW5 385 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 NOXA1Q86UR1 476 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 TRIM48Q8IWZ4 208 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 OR7G1Q8NGA0 311 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 OR5P2Q8WZ92 322 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 SLC7A6Q92536 515 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 NLNQ9BYT8 704 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 SLC22A4Q9H015 551 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 SNX7Q9UNH6 387 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 SSR3Q9UNL2 185 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 TMA7Q9Y2S6 64 aaKnown RBP20■□□□□ 0.79
PTPN18-202ENST00000347849 SPEGQ15772 3267 aa20■□□□□ 0.79
PTPN18-202ENST00000347849 H3BN98 237 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 PLD2O14939 933 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 ALX3O95076 343 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 RECKO95980 971 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 LIM2P55344 173 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 CD83Q01151 205 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 DUSP2Q05923 314 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 PUM1Q14671 1186 aaKnown RBP eCLIP19.99■□□□□ 0.79
PTPN18-202ENST00000347849 CCDC85BQ15834 202 aaPredicted RBP19.99■□□□□ 0.79
PTPN18-202ENST00000347849 CEACAM20Q6UY09 585 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 KCT2Q8NC54 265 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 FLVCR1-AS1Q8TAF5 88 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 TMEM203Q969S6 136 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 RNF170Q96K19 258 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 QRFPRQ96P65 431 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 C11orf54Q9H0W9 315 aaPredicted RBP19.99■□□□□ 0.79
PTPN18-202ENST00000347849 SERHL2Q9H4I8 314 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 MAU2Q9Y6X3 613 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 VCANP13611 3396 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 CCDC88CQ9P219 2028 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 MDC1Q14676 2089 aaKnown RBP19.99■□□□□ 0.79
PTPN18-202ENST00000347849 ARHGEF17Q96PE2 2063 aaPredicted RBP19.99■□□□□ 0.79
PTPN18-202ENST00000347849 A0A1W2PR48 441 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 FABP12A6NFH5 140 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 CERS1P27544 350 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 FRKP42685 505 aaPredicted RBP19.99■□□□□ 0.79
PTPN18-202ENST00000347849 RPS5P46782 204 aaKnown RBP19.99■□□□□ 0.79
PTPN18-202ENST00000347849 ABATP80404 500 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 NCF4Q15080 339 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 ZNF630Q2M218 657 aaPredicted RBP19.99■□□□□ 0.79
PTPN18-202ENST00000347849 GPAT3Q53EU6 434 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 PRRT3Q5FWE3 981 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 SAXO2Q658L1 398 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 C18orf63Q68DL7 685 aa19.99■□□□□ 0.79
PTPN18-202ENST00000347849 FAM160A2Q8N612 972 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms