RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 PIGUQ9H490 435 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 EGFL7Q9UHF1 273 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 SLC7A8Q9UHI5 535 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 AP3M1Q9Y2T2 418 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 FREM2Q5SZK8 3169 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 C2orf92A0A1B0GVN3 265 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 OR6C76A6NM76 312 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 DNAJA2O60884 412 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 TFPTP0C1Z6 253 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 PRKAR1AP10644 381 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 ITGAMP11215 1152 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 NCK1P16333 377 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 ME2P23368 584 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 CLCN2P51788 898 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 HSDL2Q6YN16 418 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 SLC44A2Q8IWA5 706 aaPredicted RBP17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 ARHGAP24Q8N264 748 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 NFKBIDQ8NI38 313 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 GPR151Q8TDV0 419 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 CCDC124Q96CT7 223 aaKnown RBP17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 BTBD9Q96Q07 612 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 STACQ99469 402 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 TMEM38AQ9H6F2 299 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 CCDC86Q9H6F5 360 aaKnown RBP17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 MMP25Q9NPA2 562 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 A4GALTQ9NPC4 353 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 FBXO34Q9NWN3 711 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 DKK4Q9UBT3 224 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 DOCK10Q96BY6 2186 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 FRYQ5TBA9 3013 aa17.59■□□□□ 0.41
CHMP4A-201ENST00000347519 ELOVL7A1L3X0 281 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 A8MVJ9 347 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 PEX12O00623 359 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 ASNA1O43681 348 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 ZNF354AO60765 605 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 GCM2O75603 506 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 ZIC2O95409 532 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 IGKV1D-16P01601 117 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 HTR1EP28566 365 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 MAGEA8P43361 318 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 PPICP45877 212 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 FXNQ16595 210 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 VMACQ2NL98 169 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 RPS26P11Q5JNZ5 115 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 CCNJQ5T5M9 372 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 HEPHL1Q6MZM0 1159 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 SLC29A4Q7RTT9 530 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 GALNT10Q86SR1 603 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 SLC38A5Q8WUX1 472 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 TMEM19Q96HH6 336 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 RUBCNLQ9H714 662 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 DUSP22Q9NRW4 184 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 GIN1Q9NXP7 522 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 CFL2Q9Y281 166 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 MED13Q9UHV7 2174 aa17.58■□□□□ 0.4
CHMP4A-201ENST00000347519 MAN1A2O60476 641 aa17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 ZFAND5O76080 213 aa17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 BCHEP06276 602 aa17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 CHRM4P08173 479 aa17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 DRD5P21918 477 aa17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 TRHRP34981 398 aaPredicted RBP17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 PCGF2P35227 344 aa17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 NR0B1P51843 470 aaKnown RBP17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 CDK6Q00534 326 aa17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 SCARB2Q14108 478 aa17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 ZAR1Q86SH2 424 aa17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 COX18Q8N8Q8 333 aa17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 RMND5BQ96G75 393 aaPredicted RBP17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 LCORQ96JN0 433 aaPredicted RBP17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 SPATA9Q9BWV2 254 aa17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 SSUH2Q9Y2M2 353 aa17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 USP24Q9UPU5 2620 aa17.57■□□□□ 0.4
CHMP4A-201ENST00000347519 EXPH5Q8NEV8 1989 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 FRG2CA6NGY1 282 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 DUXAA6NLW8 204 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 WWP2O00308 870 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 SLC28A2O43868 658 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 NADKO95544 446 aaPredicted RBP17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 ST13P50502 369 aaKnown RBP17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 TXNL4AP83876 142 aaKnown RBP17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 CHAF1BQ13112 559 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 ZNHIT3Q15649 155 aaPredicted RBP17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 SPATS1Q496A3 300 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 DCAF10Q5QP82 559 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 FCRLBQ6BAA4 426 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 TCTN3Q6NUS6 607 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 FIGNL1Q6PIW4 674 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 PRR22Q8IZ63 422 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 C11orf65Q8NCR3 313 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 CHDHQ8NE62 594 aaPredicted RBP17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 OR8K3Q8NH51 312 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 NUBPLQ8TB37 319 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 IP6K3Q96PC2 410 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 CCNL2Q96S94 520 aaPredicted RBP17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 SDF2Q99470 211 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 BTBD2Q9BX70 525 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 DEFB126Q9BYW3 111 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 DPH1Q9BZG8 443 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 MMADHCQ9H3L0 296 aaPredicted RBP17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 P2RX2Q9UBL9 471 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms