RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 EGLN2Q96KS0 407 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 BHLHE41Q9C0J9 482 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-202ENST00000346436 TAAR2Q9P1P5 351 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 A0A1W2PPC1 479 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 OR5K3A6NET4 321 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 FABP12A6NFH5 140 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 GGT3PA6NGU5 568 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 CHP2O43745 196 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 ACTL6BO94805 426 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 THBS2P35442 1172 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 DCTP40126 519 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 MC3RP41968 323 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 GRIN2CQ14957 1233 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 OCLNQ16625 522 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 NADSYN1Q6IA69 706 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 FAM217AQ8IXS0 508 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 ZNF565Q8N9K5 539 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 GEMIN6Q8WXD5 167 aaKnown RBP10.32□□□□□ -0.76
CLCN6-202ENST00000346436 OR5P2Q8WZ92 322 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 LGALS12Q96DT0 336 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 SCGB3A2Q96PL1 93 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 TUBB1Q9H4B7 451 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 OR6C2Q9NZP2 312 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 C2orf92A0A1B0GVN3 265 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 TMEM221A6NGB7 291 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 M0R296 226 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 HMGCLP35914 325 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 CLDN2P57739 230 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 AP3S2P59780 193 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 SLAMF1Q13291 335 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 IRF4Q15306 451 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 NDUFA5Q16718 116 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 EXOC3L2Q2M3D2 409 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 SYCE2Q6PIF2 218 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 MCATQ8IVS2 390 aaKnown RBP10.31□□□□□ -0.76
CLCN6-202ENST00000346436 FBXL6Q8N531 539 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 BOLLQ8N9W6 283 aaKnown RBP10.31□□□□□ -0.76
CLCN6-202ENST00000346436 POLDIP3Q9BY77 421 aaKnown RBP10.31□□□□□ -0.76
CLCN6-202ENST00000346436 FN3KQ9H479 309 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 DLGAP4Q9Y2H0 992 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 DAPL1A0PJW8 107 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 RLN1P04808 185 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 HCKP08631 526 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 LAMP1P11279 417 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 EIF3IQ13347 325 aaKnown RBP10.31□□□□□ -0.76
CLCN6-202ENST00000346436 SPATS1Q496A3 300 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 KCTD18Q6PI47 426 aaPredicted RBP10.31□□□□□ -0.76
CLCN6-202ENST00000346436 GALNTL5Q7Z4T8 443 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 BPHLQ86WA6 291 aaPredicted RBP10.31□□□□□ -0.76
CLCN6-202ENST00000346436 ALPK1Q96QP1 1244 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 CDX2Q99626 313 aaPredicted RBP10.31□□□□□ -0.76
CLCN6-202ENST00000346436 IL26Q9NPH9 171 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 GPR83Q9NYM4 423 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 BLOC1S5-TXNDC5H3BN57 136 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 ZNF761Q86XN6 746 aaPredicted RBP10.31□□□□□ -0.76
CLCN6-202ENST00000346436 LMNTD1Q8N9Z9 388 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 ZNF675Q8TD23 568 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 FCGR1BQ92637 280 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 ISL2Q96A47 359 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 LTB4R2Q9NPC1 389 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 TBX21Q9UL17 535 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 TLX2O43763 284 aaPredicted RBP10.31□□□□□ -0.76
CLCN6-202ENST00000346436 SLC6A8P48029 635 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 RNF144AP50876 292 aaPredicted RBP10.31□□□□□ -0.76
CLCN6-202ENST00000346436 LASP1Q14847 261 aaKnown RBP10.31□□□□□ -0.76
CLCN6-202ENST00000346436 SMN1Q16637 294 aaKnown RBP10.31□□□□□ -0.76
CLCN6-202ENST00000346436 SPARTQ8N0X7 666 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 OR56A3Q8NH54 315 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 TUBA1CQ9BQE3 449 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 MTG2Q9H4K7 406 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 ARNT2Q9HBZ2 717 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 FUOMA2VDF0 154 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 GRK5P34947 590 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 SGSHP51688 502 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 COQ5Q5HYK3 327 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 NHSL2Q5HYW2 709 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 CRB2Q5IJ48 1285 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 MANEALQ5VSG8 457 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 TBPL2Q6SJ96 375 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 RAB11FIP2Q7L804 512 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 IGFN1Q86VF2 1251 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 GPR150Q8NGU9 434 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 RHBDF1Q96CC6 855 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 FAM129BQ96TA1 746 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 PITHD1Q9GZP4 211 aaPredicted RBP10.31□□□□□ -0.76
CLCN6-202ENST00000346436 BRD7Q9NPI1 651 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 MCUBQ9NWR8 336 aa10.31□□□□□ -0.76
CLCN6-202ENST00000346436 MROH6A6NGR9 719 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 SLC30A4O14863 429 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 SSNA1O43805 119 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 CSF2P04141 144 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 ETFAP13804 333 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 EIF1AXP47813 144 aaKnown RBP10.3□□□□□ -0.76
CLCN6-202ENST00000346436 CDK3Q00526 305 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 NPRL3Q12980 569 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 PDE7AQ13946 482 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 DOC2AQ14183 400 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 SPCS2Q15005 226 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 C3orf33Q6P1S2 294 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 PNCKQ6P2M8 343 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms