RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 KDELR3O43731 214 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 PQBP1O60828 265 aaKnown RBP11.51□□□□□ -0.57
COL12A1-202ENST00000345356 SIX6O95475 246 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 RAB3DO95716 219 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 CSF1P09603 554 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 S1PR1P21453 382 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 CBLP22681 906 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 PCGF2P35227 344 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 SLC6A9P48067 706 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 ARL14EPQ8N8R7 260 aaPredicted RBP11.51□□□□□ -0.57
COL12A1-202ENST00000345356 PXT1Q8NFP0 134 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 OR52P1PQ8NH57 321 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 PROKR1Q8TCW9 393 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 ZNF514Q96K75 400 aaPredicted RBP11.51□□□□□ -0.57
COL12A1-202ENST00000345356 OR2M4Q96R27 311 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 DPP7Q9UHL4 492 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 OR2A25A4D2G3 310 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 MUSKO15146 869 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 PBX2P40425 430 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 DPP6P42658 865 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 MAPK14Q16539 360 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 ALG10Q5BKT4 473 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 RPS26P11Q5JNZ5 115 aaPredicted RBP11.51□□□□□ -0.57
COL12A1-202ENST00000345356 DNM1P34Q6PK57 102 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 LBX2Q6XYB7 198 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 FUBP3Q96I24 572 aaKnown RBP eCLIP11.51□□□□□ -0.57
COL12A1-202ENST00000345356 DNTTIP1Q9H147 329 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 PLSCR3Q9NRY6 295 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 AMY2BP19961 511 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 BDKRB2P30411 391 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 PSMD8P48556 350 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 GP2P55259 537 aaKnown RBP11.5□□□□□ -0.57
COL12A1-202ENST00000345356 PTPRRQ15256 657 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 CARD16Q5EG05 197 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 TBPL2Q6SJ96 375 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 CPOQ8IVL8 374 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 NEDD4LQ96PU5 975 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 RETREG1Q9H6L5 497 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 FBXL2Q9UKC9 423 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 MYH2Q9UKX2 1941 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 A0A0D9SEW6 157 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 GRXCR1A8MXD5 290 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 OR7A17O14581 309 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 IFNA1P01562 189 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 EPHX1P07099 455 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 PIN1Q13526 163 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-202ENST00000345356 MINDY4Q4G0A6 757 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 FRMPD2BQ6IN97 320 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 APOOLQ6UXV4 268 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 GPR142Q7Z601 462 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 CCDC116Q8IYX3 515 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 ZFP82Q8N141 532 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 TMEM145Q8NBT3 493 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 CMKLR1Q99788 373 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 POLDIP3Q9BY77 421 aaKnown RBP11.5□□□□□ -0.57
COL12A1-202ENST00000345356 GKN1Q9NS71 199 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 ZNF701Q9NV72 531 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-202ENST00000345356 CFAP20Q9Y6A4 193 aaKnown RBP11.5□□□□□ -0.57
COL12A1-202ENST00000345356 IFNA5P01569 189 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 RPS17P08708 135 aaKnown RBP11.5□□□□□ -0.57
COL12A1-202ENST00000345356 CBR1P16152 277 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 CD9P21926 228 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 WNT7BP56706 349 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 DOC2AQ14183 400 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 TOR2AQ5JU69 321 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 ADGRF1Q5T601 910 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 OR4Q3Q8NH05 313 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 ACOT11Q8WXI4 607 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-202ENST00000345356 LRFN1Q9P244 771 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 TMEM88BA6NKF7 163 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 SLC10A3P09131 477 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 RNF144AP50876 292 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-202ENST00000345356 AFF3P51826 1226 aaKnown RBP11.5□□□□□ -0.57
COL12A1-202ENST00000345356 ZNF91Q05481 1191 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 OR2G6Q5TZ20 316 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 GPR157Q5UAW9 335 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 DCUN1D3Q8IWE4 304 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 CLDN22Q8N7P3 220 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 SMAP2Q8WU79 429 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-202ENST00000345356 OR5M11Q96RB7 305 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 EPHA6Q9UF33 1036 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 CLEC4EQ9ULY5 219 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 SYN3O14994 580 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 PRICKLE3O43900 615 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-202ENST00000345356 WDPCPO95876 746 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 AKAIN1P0CW23 69 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 CHATP28329 748 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 CLPPQ16740 277 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-202ENST00000345356 ACSM3Q53FZ2 586 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 TPRG1Q6ZUI0 275 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 ANKRD53Q8N9V6 530 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 SLC7A13Q8TCU3 470 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 LMF1Q96S06 567 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 MICU1Q9BPX6 476 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 INIPQ9NRY2 104 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 DZANK1Q9NVP4 752 aa11.5□□□□□ -0.57
COL12A1-202ENST00000345356 TLX3O43711 291 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SCG5P05408 212 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 ADRB3P13945 408 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 WDR5P61964 334 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms