RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PLCXD2Q0VAA5 305 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 RCAN2Q14206 197 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 DECR1Q16698 335 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 ZNF766Q5HY98 468 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 C6orf10Q5SRN2 563 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 SLC22A10Q63ZE4 541 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 SLC25A25Q6KCM7 469 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 C16orf47Q6ZP98 133 aaPredicted RBP10.93□□□□□ -0.66
SNCA-202ENST00000345009 ZNF621Q6ZSS3 439 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 ANKRD46Q86W74 232 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 PTRH1Q86Y79 214 aaKnown RBP10.93□□□□□ -0.66
SNCA-202ENST00000345009 SLC34A3Q8N130 599 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 CPSF7Q8N684 471 aaKnown RBP10.93□□□□□ -0.66
SNCA-202ENST00000345009 AMER2Q8N7J2 671 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 ZNF441Q8N8Z8 693 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 GOLM1Q8NBJ4 401 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 DNAJB8Q8NHS0 232 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 GOT1L1Q8NHS2 421 aaPredicted RBP10.93□□□□□ -0.66
SNCA-202ENST00000345009 GPR151Q8TDV0 419 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 TSPEARQ8WU66 669 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 SPACA9Q96E40 222 aaPredicted RBP10.93□□□□□ -0.66
SNCA-202ENST00000345009 SPDL1Q96EA4 605 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 FAM120BQ96EK7 910 aaKnown RBP10.93□□□□□ -0.66
SNCA-202ENST00000345009 ACTRT3Q9BYD9 372 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 NXF5Q9H1B4 397 aaKnown RBP10.93□□□□□ -0.66
SNCA-202ENST00000345009 CXorf36Q9H7Y0 433 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 ANKRA2Q9H9E1 313 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 EQTNQ9NQ60 294 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 FAM53CQ9NYF3 392 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 CNIH4Q9P003 139 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 KLF13Q9Y2Y9 288 aaPredicted RBP10.93□□□□□ -0.66
SNCA-202ENST00000345009 RNF103-CHMP3A0A140T963 221 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 TTLL8A6PVC2 850 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 NR5A2O00482 541 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 ANGPT2O15123 496 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 SLC22A2O15244 555 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 HS6ST1O60243 411 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 MAN1A2O60476 641 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 SCN2BO60939 215 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 REM1O75628 298 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 OR6B1O95007 311 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 PSMG1O95456 288 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 KRT75O95678 551 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 AGR2O95994 175 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 P04436 131 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 HMGN2P05204 90 aaKnown RBP10.92□□□□□ -0.66
SNCA-202ENST00000345009 SP1P08047 785 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 ABCD3P28288 659 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 IL12BP29460 328 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 GABRA3P34903 492 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 SOX18P35713 384 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 MAGEA8P43361 318 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 PHC1P78364 1004 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 SF3A3Q12874 501 aaKnown RBP eCLIP10.92□□□□□ -0.66
SNCA-202ENST00000345009 EFR3AQ14156 821 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 MAPRE2Q15555 327 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 INAQ16352 499 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 PLEKHN1Q494U1 663 aaPredicted RBP10.92□□□□□ -0.66
SNCA-202ENST00000345009 TIGD2Q4W5G0 525 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 SLC6A19Q695T7 634 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 SPINK14Q6IE38 97 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 CGB2Q6NT52 195 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 MFSD12Q6NUT3 480 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 RPUSD3Q6P087 351 aaKnown RBP10.92□□□□□ -0.66
SNCA-202ENST00000345009 NUP54Q7Z3B4 507 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 C6orf120Q7Z4R8 191 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 CLECL1Q8IZS7 167 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 MDS2Q8NDY4 140 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 FAM13CQ8NE31 585 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 CATSPER1Q8NEC5 780 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 OR9I1Q8NGQ6 314 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 ADAMTS15Q8TE58 950 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 NUDT8Q8WV74 236 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 SLC9A6Q92581 669 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 JADE3Q92613 823 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 TMCO6Q96DC7 493 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 COL21A1Q96P44 957 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 SECISBP2Q96T21 854 aaKnown RBP10.92□□□□□ -0.66
SNCA-202ENST00000345009 LMF2Q9BU23 707 aaKnown RBP10.92□□□□□ -0.66
SNCA-202ENST00000345009 EPN3Q9H201 632 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 HHATLQ9HCP6 504 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 SIRT3Q9NTG7 399 aaPredicted RBP10.92□□□□□ -0.66
SNCA-202ENST00000345009 SACM1LQ9NTJ5 587 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 GIN1Q9NXP7 522 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 ADAM21Q9UKJ8 722 aa10.92□□□□□ -0.66
SNCA-202ENST00000345009 A0A1W2PP18 115 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 OR6C70A6NIJ9 312 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 C9JVG2 144 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 SNX3O60493 162 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 PPM1BO75688 479 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 NEURL1O76050 574 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 RASAL1O95294 804 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 CRYABP02511 175 aaKnown RBP10.91□□□□□ -0.66
SNCA-202ENST00000345009 SNRPB2P08579 225 aaKnown RBP10.91□□□□□ -0.66
SNCA-202ENST00000345009 ZCCHC18P0CG32 403 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 CT45A8P0DMV1 189 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 CT45A9P0DMV2 189 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 DRD4P21917 467 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 CD97P48960 835 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 CLK3P49761 638 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms