RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 SAMD14Q8IZD0 417 aaPredicted RBP12.04□□□□□ -0.48
CLK3-201ENST00000345005 CSNK1A1LQ8N752 337 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 C19orf47Q8N9M1 422 aaKnown RBP12.04□□□□□ -0.48
CLK3-201ENST00000345005 SFXN5Q8TD22 340 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 MOAP1Q96BY2 351 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 ZNF486Q96H40 463 aaPredicted RBP12.04□□□□□ -0.48
CLK3-201ENST00000345005 HOXD1Q9GZZ0 328 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 LYRM4Q9HD34 91 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 THUMPD1Q9NXG2 353 aaKnown RBP12.04□□□□□ -0.48
CLK3-201ENST00000345005 KCMF1Q9P0J7 381 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 PSORS1C1Q9UIG5 152 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 SNX11Q9Y5W9 270 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 CABIN1Q9Y6J0 2220 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 CLCA1A8K7I4 914 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 RHPN2P1A8MT19 583 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 ADAMDEC1O15204 470 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 SUV39H1O43463 412 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 MPZL2O60487 215 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 SDC3O75056 442 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 PRKRAO75569 313 aaKnown RBP12.04□□□□□ -0.48
CLK3-201ENST00000345005 IFNA14P01570 189 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 CDK1P06493 297 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 ANXA8P13928 327 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 GNSP15586 552 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 KRT20P35900 424 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 EPHA4P54764 986 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 TNFRSF17Q02223 184 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 EEF1A2Q05639 463 aaKnown RBP12.04□□□□□ -0.48
CLK3-201ENST00000345005 CEBPEQ15744 281 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 TIGD6Q17RP2 521 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 LYSMD4Q5XG99 296 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 BHLHB9Q6PI77 547 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 CEACAM20Q6UY09 585 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 TMEM64Q6YI46 380 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 DGLUCYQ7Z3D6 616 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 SLC46A3Q7Z3Q1 461 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 NFKBIDQ8NI38 313 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 CNRIP1Q96F85 164 aaPredicted RBP12.04□□□□□ -0.48
CLK3-201ENST00000345005 TCTN2Q96GX1 697 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 NDEL1Q9GZM8 345 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 IL21RQ9HBE5 538 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 SACM1LQ9NTJ5 587 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 FKBP14Q9NWM8 211 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 UCKL1Q9NWZ5 548 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 DAPP1Q9UN19 280 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 ANGPT4Q9Y264 503 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 CFL2Q9Y281 166 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 SLC22A7Q9Y694 548 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 SPACA6W5XKT8 324 aa12.04□□□□□ -0.48
CLK3-201ENST00000345005 A0A1B0GVT2 93 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 SLC9B1P1A6NJY1 282 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 WASHC1A8K0Z3 465 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 SRPX2O60687 465 aaPredicted RBP12.03□□□□□ -0.48
CLK3-201ENST00000345005 NAT1P18440 290 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 GGT2P36268 569 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 DHPSP49366 369 aaPredicted RBP12.03□□□□□ -0.48
CLK3-201ENST00000345005 PPM1FP49593 454 aaPredicted RBP12.03□□□□□ -0.48
CLK3-201ENST00000345005 ANXA11P50995 505 aaKnown RBP12.03□□□□□ -0.48
CLK3-201ENST00000345005 LIM2P55344 173 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 SELENOWP63302 87 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 TP53BP2Q13625 1128 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 RUNX2Q13950 521 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 MAPK11Q15759 364 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 CRB2Q5IJ48 1285 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 REEP3Q6NUK4 255 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 AHSA2Q719I0 299 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 CEP68Q76N32 757 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 KRT73Q86Y46 540 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 MCATQ8IVS2 390 aaKnown RBP12.03□□□□□ -0.48
CLK3-201ENST00000345005 CCDC116Q8IYX3 515 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 HORMAD2Q8N7B1 307 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 TMCO6Q96DC7 493 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 HSH2DQ96JZ2 352 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 SNX18Q96RF0 628 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 DOHHQ9BU89 302 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 TMEM121BQ9BXQ6 578 aaPredicted RBP12.03□□□□□ -0.48
CLK3-201ENST00000345005 RAB33BQ9H082 229 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 FAM60AQ9NP50 221 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 A4GALTQ9NPC4 353 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 PRMT8Q9NR22 394 aaPredicted RBP12.03□□□□□ -0.48
CLK3-201ENST00000345005 VNN3Q9NY84 501 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 PADI2Q9Y2J8 665 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 NOX1Q9Y5S8 564 aa12.03□□□□□ -0.48
CLK3-201ENST00000345005 A0A075B6Q4 140 aa12.02□□□□□ -0.48
CLK3-201ENST00000345005 SH3D21A4FU49 640 aa12.02□□□□□ -0.48
CLK3-201ENST00000345005 LAMTOR5O43504 91 aa12.02□□□□□ -0.48
CLK3-201ENST00000345005 WBP4O75554 376 aaKnown RBP12.02□□□□□ -0.48
CLK3-201ENST00000345005 GCM2O75603 506 aaPredicted RBP12.02□□□□□ -0.48
CLK3-201ENST00000345005 PDGFBP01127 241 aaPredicted RBP12.02□□□□□ -0.48
CLK3-201ENST00000345005 ITGA2P17301 1181 aa12.02□□□□□ -0.48
CLK3-201ENST00000345005 FEN1P39748 380 aaKnown RBP12.02□□□□□ -0.48
CLK3-201ENST00000345005 COPZ1P61923 177 aa12.02□□□□□ -0.48
CLK3-201ENST00000345005 CD300CQ08708 224 aa12.02□□□□□ -0.48
CLK3-201ENST00000345005 C6orf132Q5T0Z8 1188 aa12.02□□□□□ -0.48
CLK3-201ENST00000345005 STEAP3Q658P3 488 aa12.02□□□□□ -0.48
CLK3-201ENST00000345005 ANKRD34AQ69YU3 496 aa12.02□□□□□ -0.48
CLK3-201ENST00000345005 GALNT10Q86SR1 603 aa12.02□□□□□ -0.48
CLK3-201ENST00000345005 ZNF605Q86T29 641 aa12.02□□□□□ -0.48
CLK3-201ENST00000345005 CCDC103Q8IW40 242 aa12.02□□□□□ -0.48
CLK3-201ENST00000345005 DNAJC22Q8N4W6 341 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms