RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 DPYSL5Q9BPU6 564 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 PLAGL1Q9UM63 463 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 SSX5O60225 188 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 MAS1P04201 325 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 ERCC1P07992 297 aaPredicted RBP17.16■□□□□ 0.34
SMC4-201ENST00000344722 AKR1C4P17516 323 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 POLR2IP36954 125 aaKnown RBP17.16■□□□□ 0.34
SMC4-201ENST00000344722 CHAF1BQ13112 559 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 FAM124AQ86V42 546 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 TPRA1Q86W33 373 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 WDR20Q8TBZ3 569 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 ADAMTS14Q8WXS8 1223 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 OVCA2Q8WZ82 227 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 KCTD12Q96CX2 325 aaKnown RBP17.16■□□□□ 0.34
SMC4-201ENST00000344722 USP22Q9UPT9 525 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 RASD1Q9Y272 281 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 TPMTP51580 245 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 SPIN3Q5JUX0 258 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 DPY19L2P1Q6NXN4 242 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 CPPED1Q9BRF8 314 aaPredicted RBP17.16■□□□□ 0.34
SMC4-201ENST00000344722 PELOQ9BRX2 385 aaKnown RBP17.16■□□□□ 0.34
SMC4-201ENST00000344722 VNN3Q9NY84 501 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 ABRACLQ9P1F3 81 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 C1orf226A1L170 272 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 ACP2P11117 423 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 GABRA5P31644 462 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 HERV-K104P61576 105 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 AADACL4Q5VUY2 407 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 NXPE4Q6UWF7 544 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 NRMQ8IXM6 262 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 OR4K14Q8NGD5 310 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 FAM46BQ96A09 425 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 METTL17Q9H7H0 456 aaPredicted RBP17.16■□□□□ 0.34
SMC4-201ENST00000344722 PCDHGA2Q9Y5H1 932 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 C1QBP02746 253 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 STATHP02808 62 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 AKAIN1P0CW23 69 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 ZNF280AP59817 542 aaPredicted RBP17.16■□□□□ 0.34
SMC4-201ENST00000344722 DBPQ10586 325 aaPredicted RBP17.16■□□□□ 0.34
SMC4-201ENST00000344722 ITPRIPL2Q3MIP1 535 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 TRAM1L1Q8N609 369 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 TMEM98Q9Y2Y6 226 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 RGPD1P0DJD0 1748 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 IGKV6-21A0A0C4DH24 114 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 PHYHO14832 338 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 TYRP14679 529 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 HRH2P25021 359 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 GPR143P51810 404 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 TMEM163Q8TC26 289 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 SLC35B4Q969S0 331 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 UBXN10Q96LJ8 280 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 KCNK12Q9HB15 430 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 PRMT8Q9NR22 394 aaPredicted RBP17.15■□□□□ 0.34
SMC4-201ENST00000344722 YIPF1Q9Y548 306 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 TSPAN6O43657 245 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 AQP2P41181 271 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 GPR17Q13304 367 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 PLK5Q496M5 336 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 CPOQ8IVL8 374 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 ENTHD1Q8IYW4 607 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 DCUN1D4Q92564 292 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 OR5B12Q96R08 314 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 KATNBL1Q9H079 304 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 CFAP20Q9Y6A4 193 aaKnown RBP17.15■□□□□ 0.34
SMC4-201ENST00000344722 ZNF91Q05481 1191 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 RPS26P11Q5JNZ5 115 aaPredicted RBP17.15■□□□□ 0.34
SMC4-201ENST00000344722 PDZD3Q86UT5 571 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 OR5D16Q8NGK9 328 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 ELP5Q8TE02 316 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 SLC41A3Q96GZ6 507 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 METTL2AQ96IZ6 378 aaKnown RBP17.15■□□□□ 0.34
SMC4-201ENST00000344722 ACPTQ9BZG2 426 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 TRAV18A0A075B6X5 111 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 PEX14O75381 377 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 HLA-DMAP28067 261 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 LIPAP38571 399 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 RAB5CP51148 216 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 DECR1Q16698 335 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 COMMD6Q7Z4G1 85 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 OR7G3Q8NG95 312 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 HCAR2Q8TDS4 363 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 HIST1H2AAQ96QV6 131 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 ARNT2Q9HBZ2 717 aa17.15■□□□□ 0.34
SMC4-201ENST00000344722 TVP23AA6NH52 213 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 ADRB3P13945 408 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 ZNF419Q96HQ0 510 aaPredicted RBP17.14■□□□□ 0.33
SMC4-201ENST00000344722 FANCFQ9NPI8 374 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 COPS3Q9UNS2 423 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 H7BY64 318 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 ZBTB48P10074 688 aaPredicted RBP17.14■□□□□ 0.33
SMC4-201ENST00000344722 NKX6-1P78426 367 aaPredicted RBP17.14■□□□□ 0.33
SMC4-201ENST00000344722 PIN1Q13526 163 aaPredicted RBP17.14■□□□□ 0.33
SMC4-201ENST00000344722 INAVAQ3KP66 663 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 KIAA1211LQ6NV74 962 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 MAMDC4Q6UXC1 1216 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 SLC9B2Q86UD5 537 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 PRAP1Q96NZ9 151 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 HYKKA2RU49 373 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 GRXCR1A8MXD5 290 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 GABRPO00591 440 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms