RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 METRNLQ641Q3 311 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 KCTD18Q6PI47 426 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 ERMAPQ96PL5 475 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 MND1Q9BWT6 205 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 DSN1Q9H410 356 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 ZNF879B4DU55 563 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 PEPDP12955 493 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 FMO3P31513 532 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 CBFBQ13951 182 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 PYCR3Q53H96 274 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 ACPTQ9BZG2 426 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 CLEC1BQ9P126 229 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 SLC35A3Q9Y2D2 325 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 IDH3BO43837 385 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 ATP1A4Q13733 1029 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 SGCAQ16586 387 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 ZNF423Q2M1K9 1284 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 ALG10BQ5I7T1 473 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 OGFOD2Q6N063 350 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 SLC27A4Q6P1M0 643 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 HSPBAP1Q96EW2 488 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 RDH12Q96NR8 316 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 SDR39U1Q9NRG7 319 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 ZNF749O43361 778 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 GABBR2O75899 941 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 SOX14O95416 240 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 CPMP14384 443 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 SDC1P18827 310 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 AP3S2P59780 193 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 C6orf15Q6UXA7 325 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 SLCO6A1Q86UG4 719 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 ESX1Q8N693 406 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 CADM4Q8NFZ8 388 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 FAM122AQ96E09 287 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 SORBS1Q9BX66 1292 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 TRAPPC13A5PLN9 417 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 RFPL3O75679 317 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 PNMTP11086 282 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 GDF1P27539 372 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 DSG2Q14126 1118 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 KCNAB1Q14722 419 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 RGNQ15493 299 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 AGBL4Q5VU57 503 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 YOD1Q5VVQ6 348 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 TMEM184AQ6ZMB5 413 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 SLC15A3Q8IY34 581 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 GOLM1Q8NBJ4 401 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 UTP23Q9BRU9 249 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 FSCN3Q9NQT6 498 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 CCDC182A6NF36 153 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 ARGFXA6NJG6 315 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 H0YIV9 168 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 GATBO75879 557 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 RPP14O95059 124 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 HTR1AP08908 422 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 SFTPDP35247 375 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 LAIR1Q6GTX8 287 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 ARL9Q6T311 187 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 LSMEM2Q8N112 164 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 PKMYT1Q99640 499 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 KAT8Q9H7Z6 458 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 BAIAP2Q9UQB8 552 aa15.47■□□□□ 0.07
SMARCA4-201ENST00000344626 ZNF99A8MXY4 864 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 TNFRSF10AO00220 468 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 EIF1AYO14602 144 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 PKLRP30613 574 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 REEP5Q00765 189 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 QPRTQ15274 297 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 OTUD1Q5VV17 481 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 QSOX2Q6ZRP7 698 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 OR52R1Q8NGF1 315 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 DNAJA4Q8WW22 397 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 NANOS1Q8WY41 292 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 DPH2Q9BQC3 489 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 BOKQ9UMX3 212 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 ANKRD12Q6UB98 2062 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 LRRC37AA6NMS7 1700 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 MMP2P08253 660 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 UBL4AP11441 157 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 DLSTP36957 453 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 RAB25P57735 213 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 IL18Q14116 193 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 PIP5KL1Q5T9C9 394 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 CD300LGQ6UXG3 332 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 DGCR14Q96DF8 476 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 STOML2Q9UJZ1 356 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 RBMXL2O75526 392 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 DHRS4L1P0CG22 281 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 MAGEA3P43357 314 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 HTR3AP46098 478 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 UBE2NP61088 152 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 TAP2Q03519 686 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 GINS1Q14691 196 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 DPY19L2P1Q6NXN4 242 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 METTL4Q8N3J2 472 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 ZNF283Q8N7M2 679 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 IFT46Q9NQC8 304 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 CLEC4AQ9UMR7 237 aa15.46■□□□□ 0.07
SMARCA4-201ENST00000344626 LMO7DNF2Z398 122 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 PDLIM1O00151 329 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms