RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 FURINP09958 794 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 TGM1P22735 817 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 PTGS2P35354 604 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 GBX2P52951 348 aaPredicted RBP11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 WDR5P61964 334 aaKnown RBP11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 DEFB103AP81534 67 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 BAK1Q16611 211 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 GDPD1Q8N9F7 314 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 OR9A2Q8NGT5 310 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 OR5H6Q8NGV6 325 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 GAL3ST4Q96RP7 486 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 MED31Q9Y3C7 131 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 KLK4Q9Y5K2 254 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 STON1Q9Y6Q2 735 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 KCNK2O95069 426 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 MT-ND5P03915 603 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 JUNDP17535 347 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 ADH7P40394 386 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 RAB33AQ14088 237 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 GPR19Q15760 415 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 LIN54Q6MZP7 749 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 IKBIPQ70UQ0 350 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 ZNF683Q8IZ20 524 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 ZNF676Q8N7Q3 588 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 PROKR2Q8NFJ6 384 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 OR8S1Q8NH09 359 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 FANK1Q8TC84 345 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 ERMAPQ96PL5 475 aaPredicted RBP11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 GALNT9Q9HCQ5 603 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 C12orf4Q9NQ89 552 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 TBC1D24Q9ULP9 559 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 H0YIV9 168 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 K7ESM1 405 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 B4GALT2O60909 372 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 IGLV3-27P01718 113 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 ZNF3P17036 446 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 POLR2CP19387 275 aaPredicted RBP11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 NDUFV2P19404 249 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 DDCP20711 480 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 CERS1P27544 350 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 TGFBR2P37173 567 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 CLDN2P57739 230 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 TAS2R38P59533 333 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 DBPQ10586 325 aaPredicted RBP11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 C4orf46Q504U0 113 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 FAM180AQ6UWF9 173 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 JAZF1Q86VZ6 243 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 CHST4Q8NCG5 386 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 OR6T1Q8NGN1 323 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 OR2T35Q8NGX2 323 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 OR4K13Q8NH42 304 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 FATE1Q969F0 183 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 TXNDC15Q96J42 360 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 ZNF354BQ96LW1 612 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 OR4K3Q96R72 315 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 MCCC1Q96RQ3 725 aaPredicted RBP11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 TM7SF3Q9NS93 570 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 ZNF226Q9NYT6 803 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 PADI2Q9Y2J8 665 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 ANKRD34BA5PLL1 514 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 UGDHO60701 494 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 ARHGEF15O94989 841 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 NPPBP16860 134 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 TYRP1P17643 537 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 KIAA0040Q15053 153 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 POU4F3Q15319 338 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 LRRC37A5PQ49AS3 106 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 OR4C11Q6IEV9 310 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 METTL2BQ6P1Q9 378 aaKnown RBP11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 SYNPOQ8N3V7 929 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 COQ8AQ8NI60 647 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 WDR20Q8TBZ3 569 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 FKBP10Q96AY3 582 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 OR10A4Q9H209 315 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 TMEM184CQ9NVA4 438 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 SLC6A14Q9UN76 642 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 AK6Q9Y3D8 172 aaKnown RBP11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 COLEC10Q9Y6Z7 277 aa11.74□□□□□ -0.53
SNRNP48-201ENST00000342415 HMX3A6NHT5 357 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 L7N2F9 121 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 B3GALT2O43825 422 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 PCMT1P22061 227 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 DHCR24Q15392 516 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 SLC9B2Q86UD5 537 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 MFSD4AQ8N468 514 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 SLC44A3Q8N4M1 653 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 OR56A1Q8NGH5 318 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 ZNF296Q8WUU4 475 aaPredicted RBP11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 FBXL12Q9NXK8 326 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 CNOT2Q9NZN8 540 aaKnown RBP11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 RASD1Q9Y272 281 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 TEX13CA0A0J9YWL9 993 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 ANTXRLA6NF34 631 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 EIF3FO00303 357 aaPredicted RBP11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 FLRT2O43155 660 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 PRODHO43272 600 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 LRRTM2O43300 516 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 COQ9O75208 318 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 IL1RNP18510 177 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 F8A1P23610 371 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms