RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 EBPLQ9BY08 206 aa17.49■□□□□ 0.39
SMPD1-201ENST00000342245 WDR26Q9H7D7 661 aa17.49■□□□□ 0.39
SMPD1-201ENST00000342245 TSR3Q9UJK0 312 aaKnown RBP17.49■□□□□ 0.39
SMPD1-201ENST00000342245 MRPL42Q9Y6G3 142 aaKnown RBP17.49■□□□□ 0.39
SMPD1-201ENST00000342245 TRBV4-1A0A0J9YWV2 114 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 SHISA3A0PJX4 238 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 SULT1C2O00338 296 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 RAD1O60671 282 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 RGS9O75916 674 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-201ENST00000342245 S100PP25815 95 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 HSD17B2P37059 387 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 CCR6P51684 374 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 HTR4Q13639 388 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 HES5Q5TA89 166 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 FRG2Q64ET8 278 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 METTL23Q86XA0 190 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 OR6V1Q8N148 313 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 GOT1L1Q8NHS2 421 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-201ENST00000342245 FRG2BQ96QU4 278 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 MGME1Q9BQP7 344 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 PTDSS2Q9BVG9 487 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 FAIM2Q9BWQ8 316 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 CIPCQ9C0C6 399 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 TINAGL1Q9GZM7 467 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-201ENST00000342245 PIPOXQ9P0Z9 390 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 DOCK4Q8N1I0 1966 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 A0A0U1RQF3 1178 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 NAP1L6A6NFF2 107 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 LRRN3E7EW58 273 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 TEX46H3BTG2 121 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 GSTZ1O43708 216 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-201ENST00000342245 PRAMEF2O60811 474 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 GJB3O75712 270 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 EIF3GO75821 320 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMPD1-201ENST00000342245 HIST1H2ABP04908 130 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 LIMS3P0CW19 117 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 LIMS4P0CW20 117 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 MTNR1AP48039 350 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 LGALS3BPQ08380 585 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 GAB1Q13480 694 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 VGLL4Q14135 290 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 ARHGEF7Q14155 803 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 KIAA1161Q6NSJ0 714 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 HIST3H2AQ7L7L0 130 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 C12orf40Q86WS4 652 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 LINC00471Q8N535 108 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 HASPINQ8TF76 798 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 HIST1H2ACQ93077 130 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 CXorf40BQ96DE9 158 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 CINPQ9BW66 212 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-201ENST00000342245 ABCG8Q9H221 673 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 LRRN3Q9H3W5 708 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 DDX31Q9H8H2 851 aaKnown RBP17.48■□□□□ 0.39
SMPD1-201ENST00000342245 NANSQ9NR45 359 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 GULP1Q9UBP9 304 aa17.48■□□□□ 0.39
SMPD1-201ENST00000342245 C2orf78A6NCI8 922 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 SOCS7O14512 581 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 YY2O15391 372 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 FZD7O75084 574 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 ACAA1P09110 424 aaPredicted RBP17.47■□□□□ 0.39
SMPD1-201ENST00000342245 ETFAP13804 333 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 ITGB8P26012 769 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 NR0B1P51843 470 aaKnown RBP17.47■□□□□ 0.39
SMPD1-201ENST00000342245 PCBP3P57721 371 aaKnown RBP17.47■□□□□ 0.39
SMPD1-201ENST00000342245 EFNB1P98172 346 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 EEF1A2Q05639 463 aaKnown RBP17.47■□□□□ 0.39
SMPD1-201ENST00000342245 DSC1Q08554 894 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 TMEM44Q2T9K0 475 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 ANGPTL8Q6UXH0 198 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 OTOP2Q7RTS6 562 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 TPRA1Q86W33 373 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 KRT78Q8N1N4 520 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 SVBPQ8N300 66 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 CPXM2Q8N436 756 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 KLHL36Q8N4N3 616 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 ELP5Q8TE02 316 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 CHIAQ9BZP6 476 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 OR51M1Q9H341 326 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 SLC6A20Q9NP91 592 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 AKAP7Q9P0M2 348 aaPredicted RBP17.47■□□□□ 0.39
SMPD1-201ENST00000342245 MYEF2Q9P2K5 600 aaKnown RBP17.47■□□□□ 0.39
SMPD1-201ENST00000342245 MTMR11A4FU01 709 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 WRBO00258 174 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 MID1O15344 667 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 IFNGR1P15260 489 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 EPORP19235 508 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 ELAVL4P26378 380 aaKnown RBP17.47■□□□□ 0.39
SMPD1-201ENST00000342245 MVDP53602 400 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 BDH1Q02338 343 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 SFRP5Q5T4F7 317 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 SLC25A25Q6KCM7 469 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 SLC30A6Q6NXT4 461 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 FAM98AQ8NCA5 519 aaKnown RBP17.47■□□□□ 0.39
SMPD1-201ENST00000342245 GNPDA2Q8TDQ7 276 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 FGF11Q92914 225 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 BTBD1Q9H0C5 482 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 GPN1Q9HCN4 374 aaPredicted RBP17.47■□□□□ 0.39
SMPD1-201ENST00000342245 TMEM161AQ9NX61 479 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 SPHK1Q9NYA1 384 aa17.47■□□□□ 0.39
SMPD1-201ENST00000342245 OR2M5A3KFT3 312 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms