RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 LHX2P50458 406 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 GFRA1P56159 465 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 C2orf54Q08AI8 447 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 TRMT12Q53H54 448 aaKnown RBP12.89□□□□□ -0.35
COMMD4-202ENST00000338995 CCDC116Q8IYX3 515 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 GCNT2Q8N0V5 402 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 CNEP1R1Q8N9A8 125 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 OR4F6Q8NGB9 312 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 OR4K17Q8NGC6 315 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 ZNF592Q92610 1267 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 SLC35A4Q96G79 324 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 ADOQ96SZ5 270 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 SMR3AQ99954 134 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 MED18Q9BUE0 208 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 EHD3Q9NZN3 535 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 CLCF1Q9UBD9 225 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 VPS29Q9UBQ0 182 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 PCTPQ9UKL6 214 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 UTS2RQ9UKP6 389 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 WIF1Q9Y5W5 379 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 KIAA1549Q9HCM3 1950 aa12.89□□□□□ -0.35
COMMD4-202ENST00000338995 A0A1B0GTL3 188 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 A0A1W2PNV4 684 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 HMX2A2RU54 273 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 CTIFO43310 598 aaKnown RBP12.88□□□□□ -0.35
COMMD4-202ENST00000338995 CBX7O95931 251 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 PDYNP01213 254 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 KRT6AP02538 564 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 ALDOAP04075 364 aaKnown RBP12.88□□□□□ -0.35
COMMD4-202ENST00000338995 KRT6BP04259 564 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 HSD3B1P14060 373 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 PCSK2P16519 638 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 ZNF708P17019 499 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 HSD3B2P26439 372 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 CASQ1P31415 396 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 SOX18P35713 384 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 CD79BP40259 229 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 MC3RP41968 323 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 KCNJ5P48544 419 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 KRT6CP48668 564 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 CLK3P49761 638 aaKnown RBP12.88□□□□□ -0.35
COMMD4-202ENST00000338995 SERPINB9P50453 376 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 PNLIPRP2P54317 469 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 DSCR4P56555 118 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-202ENST00000338995 TRAF3Q13114 568 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 ACKR1Q16570 336 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 Q5PR19 223 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 DESI1Q6ICB0 168 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 LARP4Q71RC2 724 aaKnown RBP eCLIP12.88□□□□□ -0.354e-6■■■■■ 28.7
COMMD4-202ENST00000338995 CXorf67Q86X51 503 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-202ENST00000338995 ZNF675Q8TD23 568 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 PGM2Q96G03 612 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 WFIKKN1Q96NZ8 548 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 MRPL57Q9BQC6 102 aaKnown RBP12.88□□□□□ -0.35
COMMD4-202ENST00000338995 TSPYL1Q9H0U9 437 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 PTGES2Q9H7Z7 377 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 TAS2R9Q9NYW1 312 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 STOML1Q9UBI4 398 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 OR10H1Q9Y4A9 318 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 TESMINQ9Y4I5 508 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 MED12Q93074 2177 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 ARID1AO14497 2285 aa12.88□□□□□ -0.35
COMMD4-202ENST00000338995 UQCRHLA0A096LP55 91 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 SLC22A20A6NK97 555 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 C16orf97H3BN30 126 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 TNFSF13O75888 250 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 GRK2P25098 689 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 MPIP34949 423 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 CLDN18P56856 261 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 MRPS35P82673 323 aaKnown RBP12.87□□□□□ -0.35
COMMD4-202ENST00000338995 FAM27E3Q08E93 113 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 GALNT1Q10472 559 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-202ENST00000338995 HEPACAMQ14CZ8 416 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 OR5M10Q6IEU7 315 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 ZDHHC24Q6UX98 284 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 C20orf204Q6ZNR8 217 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 PLD6Q8N2A8 252 aaKnown RBP12.87□□□□□ -0.35
COMMD4-202ENST00000338995 C1orf52Q8N6N3 182 aaKnown RBP12.87□□□□□ -0.35
COMMD4-202ENST00000338995 STARD4Q96DR4 205 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 CNRIP1Q96F85 164 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-202ENST00000338995 ZNF681Q96N22 645 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 BTBD9Q96Q07 612 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 SHCBP1LQ9BZQ2 653 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 STMN4Q9H169 189 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-202ENST00000338995 ACSS3Q9H6R3 686 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 ZBTB26Q9HCK0 441 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 FANCFQ9NPI8 374 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 C6orf203Q9P0P8 240 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-202ENST00000338995 SENP1Q9P0U3 644 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 PPP4R1LQ9P1A2 415 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 MCM8Q9UJA3 840 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 FBXL2Q9UKC9 423 aa12.87□□□□□ -0.35
COMMD4-202ENST00000338995 MRTO4Q9UKD2 239 aaKnown RBP12.87□□□□□ -0.35
COMMD4-202ENST00000338995 FLNAP21333 2647 aaKnown RBP12.87□□□□□ -0.35
COMMD4-202ENST00000338995 GNG14A0A1W2PPG7 69 aa12.86□□□□□ -0.35
COMMD4-202ENST00000338995 CCDC151A5D8V7 595 aa12.86□□□□□ -0.35
COMMD4-202ENST00000338995 HCRTR2O43614 444 aa12.86□□□□□ -0.35
COMMD4-202ENST00000338995 ZIC3O60481 467 aa12.86□□□□□ -0.35
COMMD4-202ENST00000338995 TSPAN2O60636 221 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms