RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 NAA10P41227 235 aaPredicted RBP13.34□□□□□ -0.27
PCDH8-201ENST00000338862 BLVRAP53004 296 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 STX4Q12846 297 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 ILKQ13418 452 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 PRSS45Q7RTY3 260 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 PRICKLE2Q7Z3G6 844 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 FGD2Q7Z6J4 655 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 AMZ2Q86W34 360 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 NUDT13Q86X67 352 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 ALG14Q96F25 216 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 A3GALT2U3KPV4 340 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 PLPP1O14494 284 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 MT-ND4P03905 459 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 HOXC8P31273 242 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 PTGS2P35354 604 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 P2RX3P56373 397 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 OR10A3P58181 314 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 SREBF2Q12772 1141 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 DGLUCYQ7Z3D6 616 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 ZNF354BQ96LW1 612 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 THAP7Q9BT49 309 aaPredicted RBP13.33□□□□□ -0.28
PCDH8-201ENST00000338862 SLC28A3Q9HAS3 691 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 BRF2Q9HAW0 419 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 RBFOX1Q9NWB1 397 aaKnown RBP13.33□□□□□ -0.28
PCDH8-201ENST00000338862 KHDRBS3O75525 346 aaKnown RBP13.33□□□□□ -0.28
PCDH8-201ENST00000338862 RLN1P04808 185 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 SRPRAP08240 638 aaKnown RBP13.33□□□□□ -0.28
PCDH8-201ENST00000338862 CAMK2BQ13554 666 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 MEDAGQ5VYS4 303 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 ZNF613Q6PF04 617 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 ZNF783Q6ZMS7 281 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 SLC38A6Q8IZM9 456 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 FAM109AQ8N4B1 249 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 DCLRE1CQ96SD1 692 aaKnown RBP13.33□□□□□ -0.28
PCDH8-201ENST00000338862 C1QTNF6Q9BXI9 259 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 CACNG6Q9BXT2 260 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 DPH1Q9BZG8 443 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 BRCA1P38398 1863 aaKnown RBP13.33□□□□□ -0.28
PCDH8-201ENST00000338862 SEC16AO15027 2179 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 SLC16A5O15375 505 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 ARHGEF15O94989 841 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 IL1AP01583 271 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 ALPPP05187 535 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 PROS1P07225 676 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 HSD3B1P14060 373 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 HSD3B2P26439 372 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 STOMP27105 288 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 SLC6A11P48066 632 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 CHRNEQ04844 493 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 DSG2Q14126 1118 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 ZC3H14Q6PJT7 736 aaKnown RBP13.33□□□□□ -0.28
PCDH8-201ENST00000338862 TMC8Q8IU68 726 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 NATD1Q8N6N6 113 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 SIMC1Q8NDZ2 872 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 OR5P2Q8WZ92 322 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 UPRTQ96BW1 309 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 NUS1Q96E22 293 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 GPA33Q99795 319 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 SPATA5L1Q9BVQ7 753 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 SPATA9Q9BWV2 254 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 OR1A2Q9Y585 309 aa13.33□□□□□ -0.28
PCDH8-201ENST00000338862 TSC2P49815 1807 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 TEX13CA0A0J9YWL9 993 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 FAM171A2A8MVW0 826 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 QSOX1O00391 747 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 ACSL1P33121 698 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 MLIPQ5VWP3 458 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 SLX4IPQ5VYV7 408 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 ZDHHC20Q5W0Z9 365 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 SLC9B2Q86UD5 537 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 KREMEN2Q8NCW0 462 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 OR2T35Q8NGX2 323 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 OR8K3Q8NH51 312 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 CXorf40AQ8TE69 158 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 RFKQ969G6 155 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 RIPOR3Q96MK2 946 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 FAIM2Q9BWQ8 316 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 TMEM138Q9NPI0 162 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 DOCK4Q8N1I0 1966 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 C5orf42Q9H799 3197 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 A0A1W2PS29 197 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 PIP5K1CO60331 668 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 RPP14O95059 124 aaKnown RBP13.32□□□□□ -0.28
PCDH8-201ENST00000338862 INHAP05111 366 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 ELK1P19419 428 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 DNASE1P24855 282 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 RRAS2P62070 204 aaPredicted RBP13.32□□□□□ -0.28
PCDH8-201ENST00000338862 POU6F2P78424 691 aaPredicted RBP13.32□□□□□ -0.28
PCDH8-201ENST00000338862 C6orf132Q5T0Z8 1188 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 KHDRBS2Q5VWX1 349 aaKnown RBP13.32□□□□□ -0.28
PCDH8-201ENST00000338862 FAM71E1Q6IPT2 247 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 NKAIN4Q8IVV8 208 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 RAB42Q8N4Z0 105 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 FAM98AQ8NCA5 519 aaKnown RBP13.32□□□□□ -0.28
PCDH8-201ENST00000338862 OR13C5Q8NGS8 318 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 OR6K6Q8NGW6 343 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 OR10G6Q8NH81 332 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 RIT1Q92963 219 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 ISG20L2Q9H9L3 353 aaKnown RBP13.32□□□□□ -0.28
PCDH8-201ENST00000338862 OR6C2Q9NZP2 312 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms