RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 GMEB2Q9UKD1 530 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 PROM1O43490 865 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 AIFM1O95831 613 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 NANOGNBQ7Z5D8 188 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 CENPSQ8N2Z9 138 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 LRRC17Q8N6Y2 441 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 PSD4Q8NDX1 1056 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ANKK1Q8NFD2 765 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 OR2L3Q8NG85 312 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 AMDHD1Q96NU7 426 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 MYADMQ96S97 322 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 BARD1Q99728 777 aaKnown RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 C1GALT1Q9NS00 363 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 STARD5Q9NSY2 213 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 MRPS14O60783 128 aaKnown RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 GGT2P36268 569 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 CHRNEQ04844 493 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 CRYZQ08257 329 aaKnown RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 GRM7Q14831 915 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 COX20Q5RI15 118 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 NLGN4XQ8N0W4 816 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF676Q8N7Q3 588 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 FAM46AQ96IP4 442 aaKnown RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ADAD1Q96M93 576 aaKnown RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 PINK1Q9BXM7 581 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TMEM38AQ9H6F2 299 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 KIR3DX1Q9H7L2 352 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 NT5DC2Q9H857 520 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TCF7L1Q9HCS4 588 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TRIM36Q9NQ86 728 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ATG4BQ9Y4P1 393 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TACSTD2P09758 323 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF888P0CJ79 500 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 EDNRAP25101 427 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ALDH3B2P48448 385 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 PYCR3Q53H96 274 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 PLXDC1Q8IUK5 500 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ADAMTS16Q8TE57 1224 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 G6PC3Q9BUM1 346 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 PAK1IP1Q9NWT1 392 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ZFR2Q9UPR6 939 aaKnown RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 GPR52Q9Y2T5 361 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 SH3PXD2BA1X283 911 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 SLC9B1P1A6NJY1 282 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 PRKRAO75569 313 aaKnown RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 MAOBP27338 520 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 HOXC5Q00444 222 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 PIWIL3Q7Z3Z3 882 aaKnown RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 RAB43Q86YS6 212 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 GGHQ92820 318 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 MS4A6EQ96DS6 147 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ERMAPQ96PL5 475 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TREX2Q9BQ50 279 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 PIGUQ9H490 435 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF576Q9H609 170 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 SLC7A7Q9UM01 511 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TMX2-CTNND1H3BSU7 103 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 KIAA0513O60268 411 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ENTPD6O75354 484 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 CDK4P11802 303 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 HK1P19367 917 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TPTEP56180 551 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 RAB14P61106 215 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 PHC1P78364 1004 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TMEM151BQ8IW70 566 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ACBD7Q8N6N7 88 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 H0Y8X5 98 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 LINC01565O15544 149 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 GASTP01350 101 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 E2F2Q14209 437 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ELOAQ14241 798 aaKnown RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 LEXMQ3ZCV2 418 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 LIPKQ5VXJ0 399 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 B3GNT8Q7Z7M8 397 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 MKRN2Q9H000 416 aaKnown RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ACOT13Q9NPJ3 140 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 NDUFAF4Q9P032 175 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TRAPPC13A5PLN9 417 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 OR2B3O76000 313 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ABHD11Q8NFV4 315 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 OR7D2Q96RA2 312 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TAAR2Q9P1P5 351 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 GMEB1Q9Y692 573 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 NPIPA5A0A0B4J1W7 369 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 NPIPA7E9PJI5 369 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TNFRSF10CO14798 259 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 NPIPA8P0DM63 369 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 CD38P28907 300 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 MAGEA8P43361 318 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 ATP12AP54707 1039 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 PUM1Q14671 1186 aaKnown RBP eCLIP5.93□□□□□ -1.463e-7■■□□□ 13.4
PRKDC-202ENST00000338368 LRIT3Q3SXY7 679 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 MINDY2Q8NBR6 621 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 THEM6Q8WUY1 208 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 HRASLS5Q96KN8 279 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 AMBRA1Q9C0C7 1298 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TRPV5Q9NQA5 729 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 HCRTR2O43614 444 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 WISP3O95389 354 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 EGFP01133 1207 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms