RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 DIRAS1O95057 198 aa13.67□□□□□ -0.22
CBX3-201ENST00000337620 MAGEA2P43356 314 aa13.67□□□□□ -0.22
CBX3-201ENST00000337620 ELAVL1Q15717 326 aaKnown RBP13.67□□□□□ -0.22
CBX3-201ENST00000337620 ARHGAP11BQ3KRB8 267 aa13.67□□□□□ -0.22
CBX3-201ENST00000337620 LANCL3Q6ZV70 420 aa13.67□□□□□ -0.22
CBX3-201ENST00000337620 CATSPER1Q8NEC5 780 aa13.67□□□□□ -0.22
CBX3-201ENST00000337620 DEFB124Q8NES8 71 aa13.67□□□□□ -0.22
CBX3-201ENST00000337620 MR1Q95460 341 aa13.67□□□□□ -0.22
CBX3-201ENST00000337620 CFAP54Q96N23 3096 aa13.67□□□□□ -0.22
CBX3-201ENST00000337620 SPATA5L1Q9BVQ7 753 aa13.67□□□□□ -0.22
CBX3-201ENST00000337620 SLC38A1Q9H2H9 487 aa13.67□□□□□ -0.22
CBX3-201ENST00000337620 MKLN1Q9UL63 735 aa13.67□□□□□ -0.22
CBX3-201ENST00000337620 OAZ3Q9UMX2 235 aa13.67□□□□□ -0.22
CBX3-201ENST00000337620 DTX4Q9Y2E6 619 aa13.67□□□□□ -0.22
CBX3-201ENST00000337620 TEX51A0A1B0GUA7 166 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 PDLIM1O00151 329 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 FOXD2O60548 495 aaPredicted RBP13.66□□□□□ -0.22
CBX3-201ENST00000337620 ONECUT2O95948 504 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 JMJD7P0C870 316 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 ETS2P15036 469 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 MAP3K8P41279 467 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 SFT2D3Q587I9 215 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 EXOSC6Q5RKV6 272 aaKnown RBP13.66□□□□□ -0.22
CBX3-201ENST00000337620 DCST2Q5T1A1 773 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 PRAMEF8Q5VWM4 474 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 PRAMEF7Q5VXH5 474 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 ZBTB49Q6ZSB9 765 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 ZNF321PQ8N8H1 164 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 ZNF615Q8N8J6 731 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 C16orf52Q8NHV5 167 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 RASSF5Q8WWW0 418 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 DNAJC9Q8WXX5 260 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 ZG16BQ96DA0 208 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 C7orf34Q96L11 122 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 SDF2Q99470 211 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 BTBD2Q9BX70 525 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 NTN4Q9HB63 628 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 PISDQ9UG56 409 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 PCDHGA8Q9Y5G5 932 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 PCNX2A6NKB5 2137 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 MUC6Q6W4X9 2439 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 GXYLT2A0PJZ3 443 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 PMS2P1A4D2B8 440 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 NKX2-2O95096 273 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 CAPNS1P04632 268 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 FESP07332 822 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 ZNF23P17027 643 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 CD247P20963 164 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 RAB15P59190 212 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 POU6F2P78424 691 aaPredicted RBP13.66□□□□□ -0.22
CBX3-201ENST00000337620 PSG6Q00889 435 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 PPP1R8Q12972 351 aaKnown RBP13.66□□□□□ -0.22
CBX3-201ENST00000337620 HES3Q5TGS1 186 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 FIGNL1Q6PIW4 674 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 SLCO6A1Q86UG4 719 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 OR7G1Q8NGA0 311 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 GPR32P1Q8NGA4 272 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 SLC2A12Q8TD20 617 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 GEMIN6Q8WXD5 167 aaKnown RBP13.66□□□□□ -0.22
CBX3-201ENST00000337620 PROX1Q92786 737 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 DAZLQ92904 295 aaKnown RBP13.66□□□□□ -0.22
CBX3-201ENST00000337620 TMBIM1Q969X1 311 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 FBXL20Q96IG2 436 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 VSTM2LQ96N03 204 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 DEPDC7Q96QD5 511 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 ZNF184Q99676 751 aaPredicted RBP13.66□□□□□ -0.22
CBX3-201ENST00000337620 RSPO3Q9BXY4 272 aaPredicted RBP13.66□□□□□ -0.22
CBX3-201ENST00000337620 VCXQ9H320 206 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 GPN3Q9UHW5 284 aaPredicted RBP13.66□□□□□ -0.22
CBX3-201ENST00000337620 WDR45Q9Y484 360 aa13.66□□□□□ -0.22
CBX3-201ENST00000337620 CCDC88CQ9P219 2028 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 VSTM2BA6NLU5 285 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 CNOT3O75175 753 aaKnown RBP13.65□□□□□ -0.22
CBX3-201ENST00000337620 ZIC2O95409 532 aaPredicted RBP13.65□□□□□ -0.22
CBX3-201ENST00000337620 ALBP02768 609 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 CLPSP04118 112 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 ALPPP05187 535 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 RFX3P48380 749 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 KCNJ5P48544 419 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 IST1P53990 364 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 EMP2P54851 167 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 AQP4P55087 323 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 NRF1Q16656 503 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 FRRS1Q6ZNA5 592 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 GALNT6Q8NCL4 622 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 OR14A16Q8NHC5 309 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 METTL21AQ8WXB1 218 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 RMND5BQ96G75 393 aaPredicted RBP13.65□□□□□ -0.22
CBX3-201ENST00000337620 LIN37Q96GY3 246 aaPredicted RBP13.65□□□□□ -0.22
CBX3-201ENST00000337620 SLC29A1Q99808 456 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 LMF2Q9BU23 707 aaKnown RBP13.65□□□□□ -0.22
CBX3-201ENST00000337620 C9orf16Q9BUW7 83 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 PRODH2Q9UF12 536 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 C3orf18Q9UK00 162 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 PADI2Q9Y2J8 665 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 C15orf41Q9Y2V0 281 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 U3KQV3 271 aa13.65□□□□□ -0.22
CBX3-201ENST00000337620 IGHV3-20A0A0C4DH32 117 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 PRAMEF25A6NGN4 478 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 SOCS2O14508 198 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms