RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 Q8N9G6 341 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-201ENST00000336180 OR4K14Q8NGD5 310 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 ZNF354BQ96LW1 612 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 ZNF347Q96SE7 839 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 DAPP1Q9UN19 280 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 A4GNTQ9UNA3 340 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 NOX1Q9Y5S8 564 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 LOC100506127A0A0U1RQW1 187 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 A0A1W2PPC4 97 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 GXYLT2A0PJZ3 443 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 A8MUA0 341 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 C2orf74A8MZ97 194 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 PIP5K1CO60331 668 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 SERPINB7O75635 380 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 CYP7B1O75881 506 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 CPNE6O95741 557 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 FHP07954 510 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 UBL4AP11441 157 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 ITGA2P17301 1181 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 KIR2DS3Q14952 304 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 SUZ12Q15022 739 aaKnown RBP11.78□□□□□ -0.52
LIMK1-201ENST00000336180 COLEC12Q5KU26 742 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 CDC73Q6P1J9 531 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 LRRC25Q8N386 305 aaPredicted RBP11.78□□□□□ -0.52
LIMK1-201ENST00000336180 DENND6BQ8NEG7 585 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 OR4N2Q8NGD1 307 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 LILRB1Q8NHL6 650 aaPredicted RBP11.78□□□□□ -0.52
LIMK1-201ENST00000336180 GPBAR1Q8TDU6 330 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 APOBEC4Q8WW27 367 aaKnown RBP11.78□□□□□ -0.52
LIMK1-201ENST00000336180 GGHQ92820 318 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 SLC38A1Q9H2H9 487 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 SOHLH2Q9NX45 425 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 ADAM29Q9UKF5 820 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 EMC8O43402 210 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 CCNA2P20248 432 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 NDUFS1P28331 727 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 SOX18P35713 384 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 GGT2P36268 569 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 GPR4P46093 362 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 PGDP52209 483 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 TAS2R41P59536 307 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 RPS3AP61247 264 aaKnown RBP11.78□□□□□ -0.52
LIMK1-201ENST00000336180 BTG2P78543 158 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 TNFRSF17Q02223 184 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 KCNC4Q03721 635 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 TGM3Q08188 693 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 NFATC3Q12968 1075 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 MADCAM1Q13477 382 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 MAPK14Q16539 360 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 PAQR6Q6TCH4 344 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 NKAIN4Q8IVV8 208 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 TCEANCQ8N8B7 351 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 SUN5Q8TC36 379 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 HRASLS5Q96KN8 279 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 IER2Q9BTL4 223 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 FBRSQ9HAH7 460 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 THSD1Q9NS62 852 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 TPRKBQ9Y3C4 175 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 CHST2Q9Y4C5 530 aa11.78□□□□□ -0.52
LIMK1-201ENST00000336180 SEC14L2O76054 403 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 CBLP22681 906 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 PRR5P85299 388 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 KEAP1Q14145 624 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 FBXO43Q4G163 708 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 PTCRAQ6ISU1 281 aaPredicted RBP11.77□□□□□ -0.52
LIMK1-201ENST00000336180 BORAQ6PGQ7 559 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 SLC16A12Q6ZSM3 486 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 BTLAQ7Z6A9 289 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 ZER1Q7Z7L7 766 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 ZNF605Q86T29 641 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 TMEM151BQ8IW70 566 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 GALNT12Q8IXK2 581 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 OR4K5Q8NGD3 323 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 PLA2G12AQ9BZM1 189 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 POLR2J3Q9H1A7 115 aaKnown RBP11.77□□□□□ -0.52
LIMK1-201ENST00000336180 SLC13A4Q9UKG4 626 aa11.77□□□□□ -0.52
LIMK1-201ENST00000336180 COLQQ9Y215 455 aaPredicted RBP11.77□□□□□ -0.52
LIMK1-201ENST00000336180 ENTPD6O75354 484 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 SRFP11831 508 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 MMP11P24347 488 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 DCKP27707 260 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 SERPINB1P30740 379 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 TUBA1BP68363 451 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 ST3GAL4Q11206 333 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 PRR23CQ6ZRP0 262 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 TUBA1AQ71U36 451 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 KRT73Q86Y46 540 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 LILRB2Q8N423 598 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 STX19Q8N4C7 294 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 BAHD1Q8TBE0 780 aaPredicted RBP11.77□□□□□ -0.53
LIMK1-201ENST00000336180 GPR151Q8TDV0 419 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 MUL1Q969V5 352 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 SLC22A18Q96BI1 424 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 FAM46AQ96IP4 442 aaKnown RBP11.77□□□□□ -0.53
LIMK1-201ENST00000336180 ORAI3Q9BRQ5 295 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 C3orf14Q9HBI5 128 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 SEMA4GQ9NTN9 838 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 PILRAQ9UKJ1 303 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 GPC6Q9Y625 555 aaPredicted RBP11.77□□□□□ -0.53
LIMK1-201ENST00000336180 RP1P56715 2156 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms