RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 CDC20Q12834 499 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ASAH1Q13510 395 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 GPR50Q13585 617 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF74Q16587 644 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 PPP1R3AQ16821 1122 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ABHD15Q6UXT9 468 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 SYT13Q7L8C5 426 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ZFP82Q8N141 532 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 OR6N2Q8NGY6 317 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 SYNPRQ8TBG9 265 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 WRAP53Q9BUR4 548 aaKnown RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 PDZD7Q9H5P4 517 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 LIN28AQ9H9Z2 209 aaKnown RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 AMBNQ9NP70 447 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 TIMM13Q9Y5L4 95 aaPredicted RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 FKTNO75072 461 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 SCG5P05408 212 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 EFNA1P20827 205 aaPredicted RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 VIPR1P32241 457 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 GALNT2Q10471 571 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 TECRLQ5HYJ1 363 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 TPGS2Q68CL5 300 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 OR1S1Q8NH92 325 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ZBTB45Q96K62 511 aaPredicted RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 PRAP1Q96NZ9 151 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 HSD3B7Q9H2F3 369 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 STRAPQ9Y3F4 350 aaKnown RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 PCDHGA7Q9Y5G6 932 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 MYH7P12883 1935 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 METTL15A6NJ78 407 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 C1QBP02746 253 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ZBTB48P10074 688 aaPredicted RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 CD1DP15813 335 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 SOX10P56693 466 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 DAOAP59103 153 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 FUT2Q10981 343 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 C6orf136Q5SQH8 315 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 C6orf120Q7Z4R8 191 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM163Q8TC26 289 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 NICN1Q9BSH3 213 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 IFT22Q9H7X7 185 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 SEMA4GQ9NTN9 838 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ZMAT5Q9UDW3 170 aaKnown RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 DLGAP4Q9Y2H0 992 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 CD8B2A6NJW9 211 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 TXNL1O43396 289 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ADH1BP00325 375 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 GLUD1P00367 558 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 LCKP06239 509 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 CD8BP10966 210 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ACP2P11117 423 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 TIA1P31483 386 aaKnown RBP eCLIP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 IL13RA1P78552 427 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 HMGCS1Q01581 520 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF454Q8N9F8 522 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 SLC25A36Q96CQ1 311 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 LRIG1Q96JA1 1093 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 BEX2Q9BXY8 128 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ARHGAP39Q9C0H5 1083 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 LIN7BQ9HAP6 207 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 NOX3Q9HBY0 568 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 TJP1Q07157 1748 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 TIAM2Q8IVF5 1701 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 H7BY64 318 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 RAB3DO95716 219 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 S100A11P31949 105 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF133P52736 654 aaPredicted RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 CDK5R2Q13319 367 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 UBE2UQ5VVX9 321 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 OR9A4Q8NGU2 314 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 KLRF1Q9NZS2 232 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 KHNYNO15037 678 aaKnown RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 FMO6PO60774 539 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 SULT1C4O75897 302 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 PMS2P2O95744 297 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ARSBP15848 533 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 PGCP20142 388 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 HSD17B7P56937 341 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 BEND4Q6ZU67 534 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF679Q8IYX0 411 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 KDM8Q8N371 416 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 NKAIN3Q8N8D7 197 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 OR5B17Q8NGF7 314 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 RTP4Q96DX8 246 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM74Q96NL1 305 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 UHRF1Q96T88 793 aaPredicted RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 SEC22CQ9BRL7 303 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 GPR88Q9GZN0 384 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ADAM19Q9H013 955 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 SLC6A17Q9H1V8 727 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 C2orf72A6NCS6 295 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 SOX14O95416 240 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 PLGP00747 810 aaPredicted RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 CAV2P51636 162 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM198Q66K66 360 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 TMPRSS7Q7RTY8 843 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 KIAA0319LQ8IZA0 1049 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 OR56B1Q8NGI3 324 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 SLC39A7Q92504 469 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 GAL3ST4Q96RP7 486 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms