RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 BEX1Q9HBH7 125 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 MRPL39Q9NYK5 338 aaKnown RBP12.95□□□□□ -0.34
SYNE3-201ENST00000334258 C5AR2Q9P296 337 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 TMEM129A0AVI4 362 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 H7C4K7 107 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 TSPAN6O43657 245 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 OR12D1P0DN82 309 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 FGF9P31371 208 aaPredicted RBP12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SNRPD1P62314 119 aaKnown RBP12.95□□□□□ -0.34
SYNE3-201ENST00000334258 RPL6Q02878 288 aaKnown RBP12.95□□□□□ -0.34
SYNE3-201ENST00000334258 ZSWIM7Q19AV6 140 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SLC36A4Q6YBV0 504 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SLCO4C1Q6ZQN7 724 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 RRM2BQ7LG56 351 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 OLIG3Q7RTU3 272 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SAMD12Q8N8I0 201 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 BEST4Q8NFU0 473 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SLC38A2Q96QD8 506 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SOSTQ9BQB4 213 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 EXOSC1Q9Y3B2 195 aaKnown RBP12.95□□□□□ -0.34
SYNE3-201ENST00000334258 PLXNA4Q9HCM2 1894 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SHISA3A0PJX4 238 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 LIMS3P0CW19 117 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 LIMS4P0CW20 117 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 NR2F1P10589 423 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 SLC6A1P30531 599 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 CDH11P55287 796 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 GALEQ14376 348 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 BHLHB9Q6PI77 547 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 BRAT1Q6PJG6 821 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 C2orf73Q8N5S3 287 aaPredicted RBP12.94□□□□□ -0.34
SYNE3-201ENST00000334258 PLA2G15Q8NCC3 412 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 OR11H4Q8NGC9 324 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 CEP76Q8TAP6 659 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 TMEM169Q96HH4 297 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 GPR137Q96N19 417 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 KLF16Q9BXK1 252 aaPredicted RBP12.94□□□□□ -0.34
SYNE3-201ENST00000334258 SAP130Q9H0E3 1048 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 FANCFQ9NPI8 374 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 RDH8Q9NYR8 311 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 IRGMA1A4Y4 181 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 SSNA1O43805 119 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 SLC19A2O60779 497 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 NNMTP40261 264 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 SRP9P49458 86 aaKnown RBP12.94□□□□□ -0.34
SYNE3-201ENST00000334258 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
SYNE3-201ENST00000334258 GPR85P60893 370 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 BTG1P62324 171 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 FAM71E1Q6IPT2 247 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 Q6ZVL8 140 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 KLBQ86Z14 1044 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 IL17RCQ8NAC3 791 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 OR11H7Q8NGC8 314 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 ALG14Q96F25 216 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 ZNF354BQ96LW1 612 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 ARHGAP9Q9BRR9 750 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 PLA2G12AQ9BZM1 189 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 RSPH9Q9H1X1 276 aaPredicted RBP12.94□□□□□ -0.34
SYNE3-201ENST00000334258 KCNN2Q9H2S1 579 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 OR51J1Q9H342 316 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 ERVMER34-1Q9H9K5 563 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 IMP3Q9NV31 184 aaKnown RBP12.94□□□□□ -0.34
SYNE3-201ENST00000334258 IGLV3-16A0A075B6K0 115 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 TEX13CA0A0J9YWL9 993 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 OR5K3A6NET4 321 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 OR5K4A6NMS3 321 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 RPLP2P05387 115 aaKnown RBP12.94□□□□□ -0.34
SYNE3-201ENST00000334258 CXCL3P19876 107 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 BUD31P41223 144 aaPredicted RBP12.94□□□□□ -0.34
SYNE3-201ENST00000334258 SLC1A3P43003 542 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 GRK1Q15835 563 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 SLC27A4Q6P1M0 643 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 ADGRF3Q8IZF5 1079 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 ZNF740Q8NDX6 193 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 VWCEQ96DN2 955 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 UBQLN2Q9UHD9 624 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 CLEC4EQ9ULY5 219 aa12.94□□□□□ -0.34
SYNE3-201ENST00000334258 QSOX1O00391 747 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 TPOP07202 933 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 CTSOP43234 321 aaPredicted RBP12.93□□□□□ -0.34
SYNE3-201ENST00000334258 POLR2GP62487 172 aaKnown RBP eCLIP12.93□□□□□ -0.34
SYNE3-201ENST00000334258 EXOSC2Q13868 293 aaKnown RBP12.93□□□□□ -0.34
SYNE3-201ENST00000334258 TXNDC8Q6A555 127 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 CHMP1BQ7LBR1 199 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 C6orf120Q7Z4R8 191 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 ARL14EPQ8N8R7 260 aaPredicted RBP12.93□□□□□ -0.34
SYNE3-201ENST00000334258 GPA33Q99795 319 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 SPRTNQ9H040 489 aaPredicted RBP12.93□□□□□ -0.34
SYNE3-201ENST00000334258 DMRT3Q9NQL9 472 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 NKIRAS2Q9NYR9 191 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 TAAR2Q9P1P5 351 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 SPATA2Q9UM82 520 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 CKAP5Q14008 2032 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 FAM25EA8MYX2 175 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 RTCAO00442 366 aaKnown RBP12.93□□□□□ -0.34
SYNE3-201ENST00000334258 DNASE1P24855 282 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 PDHA2P29803 388 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 TBPL1P62380 186 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 HSF2Q03933 536 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 TECPR1Q7Z6L1 1165 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms