RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 STON1Q9Y6Q2 735 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 LAMA1P25391 3075 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 RAB36O95755 333 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 LALBAP00709 142 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 PKLRP30613 574 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 SSTR4P31391 388 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 SDC2P34741 201 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 SOX18P35713 384 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 AVPR1BP47901 424 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 HNRNPA0Q13151 305 aaKnown RBP12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 ZNF311Q5JNZ3 666 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 TMEM53Q6P2H8 277 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 PSRC1Q6PGN9 363 aaPredicted RBP12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 VITQ6UXI7 678 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 LHFPL3Q86UP9 236 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 NKAIN4Q8IVV8 208 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 OR2L3Q8NG85 312 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 BBS10Q8TAM1 723 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 RNFT2Q96EX2 444 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 BTBD1Q9H0C5 482 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 PLEKHB1Q9UF11 243 aaPredicted RBP12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 GPSM3Q9Y4H4 160 aa12.6□□□□□ -0.39
TUBA1B-201ENST00000332858 DYRK3O43781 588 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 PRICKLE3O43900 615 aaPredicted RBP12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 DNAJB6O75190 326 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 EML2O95834 649 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 THY1P04216 161 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 TIE1P35590 1138 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 CLDN2P57739 230 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 TAS2R41P59536 307 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 DEFA1P59665 94 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 DEFA3P59666 94 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 TRA2BP62995 288 aaKnown RBP12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 INSL4Q14641 139 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 FAM109BQ6ICB4 259 aaPredicted RBP12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 SLC30A6Q6NXT4 461 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 SLC25A46Q96AG3 418 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 FAIM2Q9BWQ8 316 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 DNMT3AQ9Y6K1 912 aaPredicted RBP12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 A8MV72 311 aaPredicted RBP12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 IFITM2Q01629 132 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 C1DQ13901 141 aaKnown RBP12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 C6orf132Q5T0Z8 1188 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 GDPGP1Q6ZNW5 385 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 OR2L8Q8NGY9 312 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 C1GALT1C1Q96EU7 318 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 PITHD1Q9GZP4 211 aaPredicted RBP12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 SRRQ9GZT4 340 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 TRAPPC4Q9Y296 219 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 MN1Q10571 1320 aaPredicted RBP12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 A0A1W2PQ09 198 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 FAM170BA6NMN3 283 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 CACNB4O00305 520 aaPredicted RBP12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 LIMS3P0CW19 117 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 LIMS4P0CW20 117 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 CPEP16870 476 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 RNF144AP50876 292 aaPredicted RBP12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 OR2B6P58173 313 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 AGAP6Q5VW22 663 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 RNLSQ5VYX0 342 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 KIAA1211LQ6NV74 962 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 SLC48A1Q6P1K1 146 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 B3GLCTQ6Y288 498 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 UBE2J2Q8N2K1 259 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 FLCNQ8NFG4 579 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 NUP43Q8NFH3 380 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 OR4F15Q8NGB8 312 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 ARSGQ96EG1 525 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 AGAP4Q96P64 663 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 CCDC32Q9BV29 185 aa12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 MKRN2Q9H000 416 aaKnown RBP12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 SF3B6Q9Y3B4 125 aaKnown RBP12.59□□□□□ -0.39
TUBA1B-201ENST00000332858 GON4LQ3T8J9 2241 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 A0A1W2PQL4 384 aaPredicted RBP12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 CCNKO75909 580 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 SLC2A10O95528 541 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 APOA1P02647 267 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 IL7P13232 177 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 F3P13726 295 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 SMSP52788 366 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 RUNX3Q13761 415 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 LRRC32Q14392 662 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 SLC25A30Q5SVS4 291 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 SLC16A11Q8NCK7 471 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 ANKK1Q8NFD2 765 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 OR2L5Q8NG80 312 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 TMEM163Q8TC26 289 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 COL26A1Q96A83 441 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 ARMC5Q96C12 935 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 ELP4Q96EB1 424 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 ZNF681Q96N22 645 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 TMEM74BQ9NUR3 256 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 DOCK8Q8NF50 2099 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 TRBV23OR9-2A0A075B6M9 112 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 A0A0G2JPF8 293 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 CENPVL1A0A0U1RR11 272 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 HNRNPCL2B2RXH8 293 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 HNRNPCL3B7ZW38 293 aa12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 TFECO14948 347 aaPredicted RBP12.58□□□□□ -0.4
TUBA1B-201ENST00000332858 PROM1O43490 865 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms