RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CLK3P49761 638 aaKnown RBP18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 GPLD1P80108 840 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 GPAT3Q53EU6 434 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 FHL5Q5TD97 284 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 MFSD12Q6NUT3 480 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 GALNT5Q7Z7M9 940 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 ZBTB46Q86UZ6 589 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 TMEM105Q8N8V8 129 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 SLC16A11Q8NCK7 471 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 SAP25Q8TEE9 199 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 PEX11GQ96HA9 241 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 MS4A4EQ96PG1 132 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 SEC14L3Q9UDX4 400 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 B3GNT3Q9Y2A9 372 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 FITM1A5D6W6 292 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 J3QRK9 145 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 ASNA1O43681 348 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 RNH1P13489 461 aaKnown RBP18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 XCR1P46094 333 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 CXCR4P61073 352 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 HSD11B2P80365 405 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 SYT16Q17RD7 645 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 B3GNT8Q7Z7M8 397 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 METTL27Q8N6F8 245 aaPredicted RBP18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 BBS10Q8TAM1 723 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 CCDC74AQ96AQ1 378 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 BCL7BQ9BQE9 202 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 DUSP21Q9H596 190 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 C19orf53Q9UNZ5 99 aaPredicted RBP18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 LYVE1Q9Y5Y7 322 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 ENPP4Q9Y6X5 453 aa18.95■□□□□ 0.62
RIPPLY3-201ENST00000329553 ADAMDEC1O15204 470 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 SKP1P63208 163 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 KCNC4Q03721 635 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 ERV3-1Q14264 604 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 GNA13Q14344 377 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 PRICKLE4Q2TBC4 344 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 INAVAQ3KP66 663 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 HMGN2P46Q86SG4 172 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 KRT73Q86Y46 540 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 ADAMTS15Q8TE58 950 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 CHPT1Q8WUD6 406 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 CCDC90BQ9GZT6 254 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 TMEM184BQ9Y519 407 aaPredicted RBP18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 A8MU76 341 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 H3BMH7 237 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 TNFRSF11BO00300 401 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 GABARAPO95166 117 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 IFNW1P05000 195 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 CT62P0C5K7 136 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 FUT4P22083 530 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 SLC35A2P78381 396 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 MGAT2Q10469 447 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 CDC73Q6P1J9 531 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 CARFQ8N187 725 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 PROX1Q92786 737 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 MMABQ96EY8 250 aaPredicted RBP18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 WFDC6Q9BQY6 131 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 DUSP23Q9BVJ7 150 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 RIBC2Q9H4K1 309 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 MAT2BQ9NZL9 334 aa18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 MN1Q10571 1320 aaPredicted RBP18.94■□□□□ 0.62
RIPPLY3-201ENST00000329553 A0A0G2JPF8 293 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 HNRNPCL2B2RXH8 293 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 HNRNPCL3B7ZW38 293 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 JRKO75564 520 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 SULT1C4O75897 302 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 CFIP05156 583 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 HNRNPCL4P0DMR1 293 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 ARL4DP49703 201 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 CDH12P55289 794 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 SPIBQ01892 262 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 GRM7Q14831 915 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 LAIR1Q6GTX8 287 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 NIPAL1Q6NVV3 410 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 DGAT2L6Q6ZPD8 337 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 COMTD1Q86VU5 262 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 PARP8Q8N3A8 854 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 OR6C4Q8NGE1 309 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 OR52J3Q8NH60 311 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 RASSF5Q8WWW0 418 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 SLC9A6Q92581 669 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 ZC3H10Q96K80 434 aaKnown RBP18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 ZNF354BQ96LW1 612 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 PIP5K1AQ99755 562 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 NUDT22Q9BRQ3 303 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 SLC38A1Q9H2H9 487 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 GIN1Q9NXP7 522 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 SEMA5BQ9P283 1151 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 NDRG4Q9ULP0 352 aaKnown RBP18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 FAM32AQ9Y421 112 aaKnown RBP18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 ADAMTS9Q9P2N4 1935 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 A0A087WV62 115 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 TMEM221A6NGB7 291 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 DUXAA6NLW8 204 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 M0R296 226 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 PCDHGA12O60330 932 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 PLOD3O60568 738 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 CDC123O75794 336 aaPredicted RBP18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 SLC35E2P0CK97 266 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms