RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 Q9H521 79 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 A4GALTQ9NPC4 353 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 SIRT3Q9NTG7 399 aaPredicted RBP15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 NTMQ9P121 344 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 CDC14AQ9UNH5 594 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 ANGPT4Q9Y264 503 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 TP53TG5Q9Y2B4 290 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 DTNAQ9Y4J8 743 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 MAP4K5Q9Y4K4 846 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 SNX8Q9Y5X2 465 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 NUP214P35658 2090 aaPredicted RBP15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 SYNDIG1LA6NDD5 238 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 H0YIG0 161 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 PLOD2O00469 737 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 EMC8O43402 210 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 ERAL1O75616 437 aaKnown RBP15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 PDE9AO76083 593 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 ARAFP10398 606 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 AVPR1BP47901 424 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 DSTNP60981 165 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 RUNX2Q13950 521 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 TAF11Q15544 211 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 GRAMD1BQ3KR37 738 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 PRAMEF8Q5VWM4 474 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 PRAMEF7Q5VXH5 474 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 FAAH2Q6GMR7 532 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 MED25Q71SY5 747 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 CBLL1Q75N03 491 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 C6orf120Q7Z4R8 191 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 MMP21Q8N119 569 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 RASSF5Q8WWW0 418 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 LRTOMTQ8WZ04 291 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 LZICQ8WZA0 190 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 TBC1D20Q96BZ9 403 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 SLC47A1Q96FL8 570 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 CRB3Q9BUF7 120 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 SLAMF7Q9NQ25 335 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 DNAJB9Q9UBS3 223 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 C3orf18Q9UK00 162 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 FBXL4Q9UKA2 621 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 USP22Q9UPT9 525 aa15.32■□□□□ 0.04
PDLIM1-201ENST00000329399 CLOCKO15516 846 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 ASNA1O43681 348 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 DPM1O60762 260 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 PRSS23O95084 383 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 SERPINA1P01009 418 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 EFNA1P20827 205 aaPredicted RBP15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 CDK6Q00534 326 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 OCA2Q04671 838 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 Q0VFX4 171 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 HSPB3Q12988 150 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 MYBPC3Q14896 1274 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 CRB2Q5IJ48 1285 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 DCAF10Q5QP82 559 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 C18orf63Q68DL7 685 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 REEP3Q6NUK4 255 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 ZNF551Q7Z340 670 aaPredicted RBP15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 RNF130Q86XS8 419 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 RAB43Q86YS6 212 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 CA13Q8N1Q1 262 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 FDCSPQ8NFU4 85 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 OR11G2Q8NGC1 345 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 OR51Q1Q8NH59 317 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 CNRIP1Q96F85 164 aaPredicted RBP15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 NUDT9Q9BW91 350 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 TGIF2Q9GZN2 237 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 ADNPQ9H2P0 1102 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 GPATCH2Q9NW75 528 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 PTGFRNQ9P2B2 879 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 LRCH1Q9Y2L9 728 aa15.31■□□□□ 0.04
PDLIM1-201ENST00000329399 DUXAA6NLW8 204 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 EIF4E1BA6NMX2 242 aaKnown RBP15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 IDSB3KWA1 339 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 TIPRLO75663 272 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 CEACAM4O75871 244 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 GPR75O95800 540 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 RNH1P13489 461 aaKnown RBP15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 PORP16435 677 aaPredicted RBP15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 PEX2P28328 305 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 KHKP50053 298 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 XKP51811 444 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 TP53BP2Q13625 1128 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 SCARB2Q14108 478 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 PPP4R4Q6NUP7 873 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 ZCCHC12Q6PEW1 402 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 IZUMO2Q6UXV1 221 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 ZNF595Q8IYB9 648 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 C9orf43Q8TAL5 461 aaPredicted RBP15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 SLC35G5Q96KT7 338 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 SEPHS2Q99611 448 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 SPATA5L1Q9BVQ7 753 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 RBCK1Q9BYM8 510 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 VN1R1Q9GZP7 353 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 MKKSQ9NPJ1 570 aaPredicted RBP15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 TUBD1Q9UJT1 453 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 BAG5Q9UL15 447 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 MKL2Q9ULH7 1088 aa15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 RP1L1Q8IWN7 2480 aaPredicted RBP15.3■□□□□ 0.04
PDLIM1-201ENST00000329399 COL12A1Q99715 3063 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms