RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 LUZP4Q9P127 313 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 FKBPLQ9UIM3 349 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 AHDC1Q5TGY3 1603 aaPredicted RBP6.72□□□□□ -1.33
SMC1A-201ENST00000322213 LOC102723532A0A0G2JNH3 316 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 LOC105371267A0A1B0GV96 52 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 CIB4A0PJX0 185 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 HLA-AP01891 365 aaKnown RBP6.72□□□□□ -1.33
SMC1A-201ENST00000322213 SFTPBP07988 381 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 HTR3AP46098 478 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 C17orf107Q6ZR85 190 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 C12orf40Q86WS4 652 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 DCUN1D4Q92564 292 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 MAL2Q969L2 176 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 CDKN2AIPNLQ96HQ2 116 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 QRSL1Q9H0R6 528 aaKnown RBP6.72□□□□□ -1.33
SMC1A-201ENST00000322213 GIMAP2Q9UG22 337 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 SLC6A5Q9Y345 797 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 HES2Q9Y543 173 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 COL6A6A6NMZ7 2263 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 YJEFN3A6XGL0 299 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 PCDH8O95206 1070 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 C6orf47O95873 294 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 IFNA1P01562 189 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 ALPIP09923 528 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 LASP1Q14847 261 aaKnown RBP6.72□□□□□ -1.33
SMC1A-201ENST00000322213 CDC6Q99741 560 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 PRRT1Q99946 306 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 SEC22CQ9BRL7 303 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 PITHD1Q9GZP4 211 aaPredicted RBP6.72□□□□□ -1.33
SMC1A-201ENST00000322213 A0A1W2PQ67 120 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 ACOT8O14734 319 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 HSPA12AO43301 675 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 CACNG3O60359 315 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 PSEN2P49810 448 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 GXYLT1Q4G148 440 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 MBOAT1Q6ZNC8 495 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 RASGRP3Q8IV61 690 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 TEX26Q8N6G2 289 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 STK35Q8TDR2 534 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 DPH2Q9BQC3 489 aaPredicted RBP6.72□□□□□ -1.33
SMC1A-201ENST00000322213 ZFP57Q9NU63 452 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 DLGAP4Q9Y2H0 992 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 TRAV19A0A0A6YYK7 116 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 DAOAP59103 153 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 TAS2R31P59538 309 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 MRPS6P82932 125 aaKnown RBP6.72□□□□□ -1.33
SMC1A-201ENST00000322213 SGCGQ13326 291 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 MEF2DQ14814 521 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 RAB11BQ15907 218 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 SHEQ5VZ18 495 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF783Q6ZMS7 281 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 LNX2Q8N448 690 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 HAVCR2Q8TDQ0 301 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 MALSU1Q96EH3 234 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 USB1Q9BQ65 265 aaKnown RBP6.72□□□□□ -1.33
SMC1A-201ENST00000322213 GSX2Q9BZM3 304 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 STYXL1Q9Y6J8 313 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 GRIN3BO60391 1043 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 FZD7O75084 574 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 KDELR2P33947 212 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 TOR1AIP1Q5JTV8 583 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 ZDHHC14Q8IZN3 488 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 GPC2Q8N158 579 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 SLC16A10Q8TF71 515 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 ACSL6Q9UKU0 697 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 SARDHQ9UL12 918 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 SLC22A14Q9Y267 594 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 ARPC1BO15143 372 aaKnown RBP6.71□□□□□ -1.33
SMC1A-201ENST00000322213 ERCC1P07992 297 aaPredicted RBP6.71□□□□□ -1.33
SMC1A-201ENST00000322213 FRKP42685 505 aaPredicted RBP6.71□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF155Q12901 538 aaPredicted RBP6.71□□□□□ -1.33
SMC1A-201ENST00000322213 ALKAL2Q6UX46 152 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 EID2Q8N6I1 236 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 POGLUT1Q8NBL1 392 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 SLC25A32Q9H2D1 315 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 KCNJ16Q9NPI9 418 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 RHCGQ9UBD6 479 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 PCTPQ9UKL6 214 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 ACACAQ13085 2346 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 D6RAR5 112 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 SLC34A2O95436 690 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 ADARB1P78563 741 aaKnown RBP6.71□□□□□ -1.33
SMC1A-201ENST00000322213 CAP1Q01518 475 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 TEKQ02763 1124 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 ARHGAP11AQ6P4F7 1023 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 DNAJC5GQ8N7S2 189 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 OR6S1Q8NH40 331 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 TSGA13Q96PP4 275 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 NDUFB11Q9NX14 153 aa6.71□□□□□ -1.33
SMC1A-201ENST00000322213 RPH3AQ9Y2J0 694 aaPredicted RBP6.71□□□□□ -1.33
SMC1A-201ENST00000322213 ANKRD66B4E2M5 251 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 MSCO60682 206 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 KLK1P06870 262 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 SCAPQ12770 1279 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 VEZF1Q14119 521 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 GAS6Q14393 721 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 UQCC3Q6UW78 93 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 LYPD4Q6UWN0 246 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 APOOLQ6UXV4 268 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 HIST2H3AQ71DI3 136 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms