RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 DSG2Q14126 1118 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 RBM48Q5RL73 367 aaKnown RBP16.63■□□□□ 0.25
RAB39A-201ENST00000320578 MLIPQ5VWP3 458 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 TYW3Q6IPR3 259 aaKnown RBP16.63■□□□□ 0.25
RAB39A-201ENST00000320578 GUSBP11Q6P575 273 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 OFCC1Q8IZS5 231 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 ZNF786Q8N393 782 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 LINC00471Q8N535 108 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 OR4D11Q8NGI4 311 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 ADAMTS16Q8TE57 1224 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 ALPK1Q96QP1 1244 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 FEVQ99581 238 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 CACYBPQ9HB71 228 aaKnown RBP16.63■□□□□ 0.25
RAB39A-201ENST00000320578 LANCL2Q9NS86 450 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 KLHL28Q9NXS3 571 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 NDRG4Q9ULP0 352 aaKnown RBP16.63■□□□□ 0.25
RAB39A-201ENST00000320578 ZNF232Q9UNY5 417 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 WDR45Q9Y484 360 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 A0A1W2PRQ8 180 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 TGFBR3LH3BV60 316 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 BCKDKO14874 412 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 STX11O75558 287 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 ZIC2O95409 532 aaPredicted RBP16.63■□□□□ 0.25
RAB39A-201ENST00000320578 H1F0P07305 194 aaKnown RBP16.63■□□□□ 0.25
RAB39A-201ENST00000320578 RPS4Y1P22090 263 aaKnown RBP16.63■□□□□ 0.25
RAB39A-201ENST00000320578 ISL1P61371 349 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 ACY1Q03154 408 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 FUT7Q11130 342 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 DGCR6Q14129 220 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 TTLL10Q6ZVT0 673 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 PEX5LQ8IYB4 626 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 PARP8Q8N3A8 854 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 SLC5A8Q8N695 610 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 SIMC1Q8NDZ2 872 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 OR52R1Q8NGF1 315 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 OR52P1PQ8NH57 321 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 HDAC2Q92769 488 aaKnown RBP16.63■□□□□ 0.25
RAB39A-201ENST00000320578 FUZQ9BT04 418 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 SLC13A4Q9UKG4 626 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 A4GNTQ9UNA3 340 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 PCDH15Q96QU1 1955 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 CABIN1Q9Y6J0 2220 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 A0A087WXM4 84 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 CPED1A4D0V7 1026 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 FAAHO00519 579 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 FCMRO60667 390 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 SEMA7AO75326 666 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 TFAP2AP05549 437 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 CKMT1AP12532 417 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 CBLP22681 906 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 DUSP3P51452 185 aaPredicted RBP16.62■□□□□ 0.25
RAB39A-201ENST00000320578 NR1H2P55055 460 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 NPRL3Q12980 569 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 TOP3AQ13472 1001 aaPredicted RBP16.62■□□□□ 0.25
RAB39A-201ENST00000320578 LARS2Q15031 903 aaKnown RBP16.62■□□□□ 0.25
RAB39A-201ENST00000320578 SYT16Q17RD7 645 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 SNAP47Q5SQN1 464 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 PERM1Q5SV97 790 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 DCST2Q5T1A1 773 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 ZNF770Q6IQ21 691 aaPredicted RBP16.62■□□□□ 0.25
RAB39A-201ENST00000320578 ZNF574Q6ZN55 896 aaPredicted RBP16.62■□□□□ 0.25
RAB39A-201ENST00000320578 DGAT2L6Q6ZPD8 337 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 QSOX2Q6ZRP7 698 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 TSPYL5Q86VY4 417 aaPredicted RBP16.62■□□□□ 0.25
RAB39A-201ENST00000320578 ZNF619Q8N2I2 560 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 COX18Q8N8Q8 333 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 PRRC1Q96M27 445 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 ING2Q9H160 280 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 LRRN3Q9H3W5 708 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 ZNF556Q9HAH1 456 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 PAPOLBQ9NRJ5 636 aaKnown RBP16.62■□□□□ 0.25
RAB39A-201ENST00000320578 FGF21Q9NSA1 209 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 TMCC3Q9ULS5 477 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 SRPK3Q9UPE1 567 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 PCDHGA8Q9Y5G5 932 aa16.62■□□□□ 0.25
RAB39A-201ENST00000320578 A0A1B0GX78 115 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 A0A1W2PQM1 296 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 AGAP5A6NIR3 686 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 PCDH17O14917 1159 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 EMDP50402 254 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 POU6F2P78424 691 aaPredicted RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 BTG2P78543 158 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 EXOSC7Q15024 291 aaKnown RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 ZNHIT3Q15649 155 aaPredicted RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 EIPR1Q53HC9 387 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 TRIM61Q5EBN2 209 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 BMP8AQ7Z5Y6 402 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 COMTD1Q86VU5 262 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 LACC1Q8IV20 430 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 TAGAPQ8N103 731 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 OR7G1Q8NGA0 311 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 OR52J3Q8NH60 311 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 APOL4Q9BPW4 351 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 RIBC2Q9H4K1 309 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 ANKRD19PQ9H560 264 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 MYOCOSA0A1B0GUC4 107 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 SMIM31A0A1B0GVY4 71 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 KIAA0513O60268 411 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 PRAMEF2O60811 474 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 DBIP07108 87 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms