RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 MAN2C1Q9NTJ4 1040 aa7.09□□□□□ -1.27
IFT88-201ENST00000319980 GIN1Q9NXP7 522 aa7.09□□□□□ -1.27
IFT88-201ENST00000319980 GPR55Q9Y2T6 319 aaPredicted RBP7.09□□□□□ -1.27
IFT88-201ENST00000319980 CLDN24A6NM45 220 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 SGK494L7N484 410 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 FGF17O60258 216 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 GABARAPO95166 117 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 ZIC2O95409 532 aaPredicted RBP7.09□□□□□ -1.28
IFT88-201ENST00000319980 CDK1P06493 297 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 PPM1FP49593 454 aaPredicted RBP7.09□□□□□ -1.28
IFT88-201ENST00000319980 MAZP56270 477 aaKnown RBP7.09□□□□□ -1.28
IFT88-201ENST00000319980 TAS2R41P59536 307 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 VBP1P61758 197 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 UBXN2BQ14CS0 331 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 TUSC1Q2TAM9 212 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 USP53Q70EK8 1073 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 IQCHQ86VS3 1027 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 MEX3DQ86XN8 651 aaKnown RBP7.09□□□□□ -1.28
IFT88-201ENST00000319980 OR2L13Q8N349 312 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 TMEM52Q8NDY8 209 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 B3GNT7Q8NFL0 401 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 PRRC1Q96M27 445 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 ORAI3Q9BRQ5 295 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 ARMC7Q9H6L4 198 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 IL21RQ9HBE5 538 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 SLC2A4RGQ9NR83 387 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 CALML5Q9NZT1 146 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 SPACA6W5XKT8 324 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 DSPPQ9NZW4 1301 aa7.09□□□□□ -1.28
IFT88-201ENST00000319980 IGHV1OR15-9A0A0B4J2B8 117 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 CPSF4LA6NMK7 179 aaKnown RBP7.08□□□□□ -1.28
IFT88-201ENST00000319980 TLR4O00206 839 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 ZNF217O75362 1048 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 CD36P16671 472 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 NT5EP21589 574 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 CDH3P22223 829 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 MMP11P24347 488 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 SOX18P35713 384 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 EMP3P54852 163 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 RELAQ04206 551 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 DUSP5Q16690 384 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 CCNJQ5T5M9 372 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 PRAMEF8Q5VWM4 474 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 PRAMEF7Q5VXH5 474 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 CDC73Q6P1J9 531 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 FAM92BQ6ZTR7 304 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 RNF44Q7L0R7 432 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 CLIP4Q8N3C7 705 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 OR52P1PQ8NH57 321 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 RPL3LQ92901 407 aaKnown RBP7.08□□□□□ -1.28
IFT88-201ENST00000319980 YIPF6Q96EC8 236 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 GPA33Q99795 319 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 FUZQ9BT04 418 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 GPR27Q9NS67 375 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 CLN6Q9NWW5 311 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 CHST2Q9Y4C5 530 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 KLK4Q9Y5K2 254 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 SDK1Q7Z5N4 2213 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 M0R3G1 203 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 CYR61O00622 381 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 MPZL2O60487 215 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 GALR3O60755 368 aaPredicted RBP7.08□□□□□ -1.28
IFT88-201ENST00000319980 LIPAP38571 399 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 MLLT10P55197 1068 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 NCS1P62166 190 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 GPR68Q15743 365 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 INAVAQ3KP66 663 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 UBE2UQ5VVX9 321 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 CASP12Q6UXS9 341 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 IQCF1Q8N6M8 205 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 AVL9Q8NBF6 648 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 NDNFQ8TB73 568 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 ITPAQ9BY32 194 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 MIR1-1HGQ9H1L0 117 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 LYRM4Q9HD34 91 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 FKBP14Q9NWM8 211 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 KLHL28Q9NXS3 571 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 TAS2R16Q9NYV7 291 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 NTMQ9P121 344 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 PTGFRNQ9P2B2 879 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 DOLKQ9UPQ8 538 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 WDR45Q9Y484 360 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 COL4A2P08572 1712 aa7.08□□□□□ -1.28
IFT88-201ENST00000319980 A0A087WUU8 490 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 SLC9B1P1A6NJY1 282 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 CHURC1-FNTBB4DL54 471 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 SLC22A1O15245 554 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 ENTPD6O75354 484 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 CYP7B1O75881 506 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 CLPXO76031 633 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 NTN1O95631 604 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 GPR75O95800 540 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 WNT1P04628 370 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 CCNYL3P0C7X3 344 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 HSMCR30P0CW71 290 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 TRHRP34981 398 aaPredicted RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 BMXP51813 675 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 RGS8P57771 180 aaPredicted RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 TBCEQ15813 527 aaPredicted RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 TIGD6Q17RP2 521 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms