RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ZDHHC12Q96GR4 267 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 MS4A4EQ96PG1 132 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 PELOQ9BRX2 385 aaKnown RBP13.05□□□□□ -0.32
SPAST-201ENST00000315285 ACTR6Q9GZN1 396 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 RANBP3Q9H6Z4 567 aaPredicted RBP13.05□□□□□ -0.32
SPAST-201ENST00000315285 GPN2Q9H9Y4 310 aaPredicted RBP13.05□□□□□ -0.32
SPAST-201ENST00000315285 H2AFB2P0C5Z0 115 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 ADORA3P0DMS8 318 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 PTGS2P35354 604 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 ULK3Q6PHR2 472 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 CYP4V2Q6ZWL3 525 aaPredicted RBP13.05□□□□□ -0.32
SPAST-201ENST00000315285 EGFL6Q8IUX8 553 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 CPOQ8IVL8 374 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 FOXRED2Q8IWF2 684 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 SPAG16Q8N0X2 631 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 PLEKHA6Q9Y2H5 1048 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 ALG5Q9Y673 324 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 COL22A1Q8NFW1 1626 aaPredicted RBP13.05□□□□□ -0.32
SPAST-201ENST00000315285 AGAP5A6NIR3 686 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 SCO2O43819 266 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 HMGN2P05204 90 aaKnown RBP13.05□□□□□ -0.32
SPAST-201ENST00000315285 HLA-FP30511 346 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 TMEM53Q6P2H8 277 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 LRRN1Q6UXK5 716 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 LKAAEAR1Q8TD35 194 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 CASTOR1Q8WTX7 329 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 BADQ92934 168 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 KCNN1Q92952 543 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 CACNG6Q9BXT2 260 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 PDE7BQ9NP56 450 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 OLAHQ9NV23 265 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 ALKBH4Q9NXW9 302 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 C12orf71A8MTZ7 269 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 CASC3O15234 703 aaKnown RBP13.05□□□□□ -0.32
SPAST-201ENST00000315285 FRS3O43559 492 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 RAB3BP20337 219 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 ERP29P30040 261 aaKnown RBP13.05□□□□□ -0.32
SPAST-201ENST00000315285 PRLHRP49683 370 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 ZNF542PQ5EBM4 170 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 RBM12BQ8IXT5 1001 aaKnown RBP13.05□□□□□ -0.32
SPAST-201ENST00000315285 OR9A2Q8NGT5 310 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 C17orf50Q8WW18 174 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 DNAJA3Q96EY1 480 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 RTP3Q9BQQ7 232 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 PTGES2Q9H7Z7 377 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 MLXQ9UH92 298 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 OR52A4PA6NMU1 304 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 PRLP01236 227 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 CFL1P23528 166 aaKnown RBP13.04□□□□□ -0.32
SPAST-201ENST00000315285 SPCS2Q15005 226 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 SMN1Q16637 294 aaKnown RBP13.04□□□□□ -0.32
SPAST-201ENST00000315285 FRMPD2BQ6IN97 320 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 RNF111Q6ZNA4 994 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 KCTD9Q7L273 389 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 ALDH16A1Q8IZ83 802 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 PINK1Q9BXM7 581 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 RNF121Q9H920 327 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 FOLH1BQ9HBA9 442 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 HBA1P69905 142 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 PLCXD2Q0VAA5 305 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 ARHGAP19Q14CB8 494 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 TBCEQ15813 527 aaPredicted RBP13.04□□□□□ -0.32
SPAST-201ENST00000315285 GGTA1PQ4G0N0 100 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 ZNF334Q9HCZ1 680 aaPredicted RBP13.04□□□□□ -0.32
SPAST-201ENST00000315285 FBXO9Q9UK97 447 aaPredicted RBP13.04□□□□□ -0.32
SPAST-201ENST00000315285 TPD52L2O43399 206 aaKnown RBP13.04□□□□□ -0.32
SPAST-201ENST00000315285 SNAPC5O75971 98 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 C1orf105O95561 183 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 KLK3P07288 261 aaPredicted RBP13.04□□□□□ -0.32
SPAST-201ENST00000315285 C1SP09871 688 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 NUDT7P0C024 238 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 MAN2A2P49641 1150 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 SLC5A12Q1EHB4 618 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 SBSNQ6UWP8 590 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 DPH1Q9BZG8 443 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 CNOT2Q9NZN8 540 aaKnown RBP13.04□□□□□ -0.32
SPAST-201ENST00000315285 HSFX1Q9UBD0 423 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 C19orf25Q9UFG5 118 aaPredicted RBP13.04□□□□□ -0.32
SPAST-201ENST00000315285 GON4LQ3T8J9 2241 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 N4BP2Q86UW6 1770 aaPredicted RBP13.04□□□□□ -0.32
SPAST-201ENST00000315285 TOXO94900 526 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 CAPNS1P04632 268 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 ENDOUP21128 410 aaKnown RBP13.04□□□□□ -0.32
SPAST-201ENST00000315285 ARNTP27540 789 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 HOXC12P31275 282 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 RGS6P49758 472 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 ATXN7L3Q14CW9 347 aaPredicted RBP13.04□□□□□ -0.32
SPAST-201ENST00000315285 RAB12Q6IQ22 244 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 ZNF440Q8IYI8 595 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 SYT14Q8NB59 555 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 DHDHQ9UQ10 334 aa13.04□□□□□ -0.32
SPAST-201ENST00000315285 APBB3O95704 486 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 POLR2IP36954 125 aaKnown RBP13.03□□□□□ -0.32
SPAST-201ENST00000315285 S100A10P60903 97 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 ACOT4Q8N9L9 421 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 OR2L2Q8NH16 312 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 DAZLQ92904 295 aaKnown RBP13.03□□□□□ -0.32
SPAST-201ENST00000315285 FKBP10Q96AY3 582 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 TGM7Q96PF1 710 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 ZFYVE21Q9BQ24 234 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms