RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TSSK3Q96PN8 268 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 STMN4Q9H169 189 aaPredicted RBP13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 SSU72Q9NP77 194 aaKnown RBP13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 MIEF1Q9NQG6 463 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 PFDN4Q9NQP4 134 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 SENP1Q9P0U3 644 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 BAIAP2L1Q9UHR4 511 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 RNF6Q9Y252 685 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 ZNF407Q9C0G0 2248 aa13.33□□□□□ -0.28
PPP1CA-201ENST00000312989 EXPH5Q8NEV8 1989 aa13.33□□□□□ -0.28
PPP1CA-201ENST00000312989 EML6Q6ZMW3 1958 aa13.33□□□□□ -0.28
PPP1CA-201ENST00000312989 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 ICOSLGO75144 302 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 SLITRK5O94991 958 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 GLI4P10075 376 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 BCKDHAP12694 445 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 IGFBP2P18065 325 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 ADH7P40394 386 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 MAN2A2P49641 1150 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 SMSP52788 366 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 NHSL2Q5HYW2 709 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 DCST1Q5T197 706 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 ZNF551Q7Z340 670 aaPredicted RBP13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 CLHC1Q8NHS4 586 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 AGR3Q8TD06 166 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 NUDT8Q8WV74 236 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 GFM2Q969S9 779 aaKnown RBP13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 ZBTB9Q96C00 473 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 GIMAP5Q96F15 307 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 JSRP1Q96MG2 331 aaPredicted RBP13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 BBS4Q96RK4 519 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 TTYH2Q9BSA4 534 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 LMF2Q9BU23 707 aaKnown RBP13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 OSBPL11Q9BXB4 747 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 RTN4RQ9BZR6 473 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 REEP4Q9H6H4 257 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 GIMAP4Q9NUV9 329 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 NTMQ9P121 344 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 TMED5Q9Y3A6 229 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 PCDHGB3Q9Y5G1 929 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 NCKAP5O14513 1909 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 C2orf72A6NCS6 295 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 PRAMEF25A6NGN4 478 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 LYPLA1O75608 230 aaPredicted RBP13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 TOXO94900 526 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 ACVR2AP27037 513 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 TRPC1P48995 793 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 SNTA1Q13424 505 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 EIPR1Q53HC9 387 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 TMEM198Q66K66 360 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 SLC30A6Q6NXT4 461 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 WDR53Q7Z5U6 358 aaPredicted RBP13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 CCDC71Q8IV32 467 aaPredicted RBP13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 ULK2Q8IYT8 1036 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 ZNF295-AS1Q8N0V1 137 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 MARVELD3Q96A59 401 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 SARAFQ96BY9 339 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 SDCCAG3Q96C92 435 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 COL21A1Q96P44 957 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 ADOQ96SZ5 270 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 SORT1Q99523 831 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 TRIM8Q9BZR9 551 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 PRDM14Q9GZV8 571 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 NPDC1Q9NQX5 325 aaPredicted RBP13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 SIRT3Q9NTG7 399 aaPredicted RBP13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 FLRT3Q9NZU0 649 aa13.32□□□□□ -0.28
PPP1CA-201ENST00000312989 GNB5O14775 395 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 RGS16O15492 202 aaPredicted RBP13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 HNRNPRO43390 633 aaKnown RBP13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 GDF1P27539 372 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 PMPCAQ10713 525 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 GAB1Q13480 694 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 GALNTL6Q49A17 601 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 C6orf136Q5SQH8 315 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 ZNF585AQ6P3V2 769 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 ANGPTL8Q6UXH0 198 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 LIX1LQ8IVB5 337 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 SLC44A2Q8IWA5 706 aaPredicted RBP13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 DDIASQ8IXT1 998 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 PGM2Q96G03 612 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 TIMP4Q99727 224 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 ENKD1Q9H0I2 346 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 EML4Q9HC35 981 aaKnown RBP13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 B4GALT7Q9UBV7 327 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 HAO1Q9UJM8 370 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 SLC6A5Q9Y345 797 aa13.31□□□□□ -0.28
PPP1CA-201ENST00000312989 PDZD2O15018 2839 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 PCNX1Q96RV3 2341 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 A0A0G2JNJ9 132 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 FIGNL2A6NMB9 653 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 PDPK1O15530 556 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 CTIFO43310 598 aaKnown RBP13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 AKAP10O43572 662 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 FADS1O60427 444 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 WDR1O75083 606 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 COQ9O75208 318 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 SKAP2O75563 359 aaPredicted RBP13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 IGKV1D-16P01601 117 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 CYP4B1P13584 511 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 ELAVL4P26378 380 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms