RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 POP4O95707 220 aaKnown RBP12.32□□□□□ -0.44
TRIM35-201ENST00000305364 HMGN1P05114 100 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 ITGB7P26010 798 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 RPL35P42766 123 aaKnown RBP12.32□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF33BQ06732 778 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 INSL4Q14641 139 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 GPR155Q7Z3F1 870 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 C9orf62Q8N4C0 152 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRIM35-201ENST00000305364 DDX31Q9H8H2 851 aaKnown RBP12.32□□□□□ -0.44
TRIM35-201ENST00000305364 SLAMF7Q9NQ25 335 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 ATPIF1Q9UII2 106 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 SHOXO15266 292 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 ELFN1P0C7U0 828 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 GNSP15586 552 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF8P17098 575 aaPredicted RBP12.31□□□□□ -0.44
TRIM35-201ENST00000305364 MMP11P24347 488 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 PTGER1P34995 402 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 SLC6A12P48065 614 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 FNTBP49356 437 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 NCBP2P52298 156 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRIM35-201ENST00000305364 STK11Q15831 433 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 SYPL1Q16563 259 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 CCSMST1Q4G0I0 132 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 ALKAL2Q6UX46 152 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 QSOX2Q6ZRP7 698 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 GPR135Q8IZ08 494 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 FBXO15Q8NCQ5 510 aaPredicted RBP12.31□□□□□ -0.44
TRIM35-201ENST00000305364 DUSP18Q8NEJ0 188 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 GNPDA2Q8TDQ7 276 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 SLC5A11Q8WWX8 675 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 OR5P2Q8WZ92 322 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 ST8SIA4Q92187 359 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 SMPDL3AQ92484 453 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 TRMT61BQ9BVS5 477 aaKnown RBP12.31□□□□□ -0.44
TRIM35-201ENST00000305364 OSGEPL1Q9H4B0 414 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 B3GAT2Q9NPZ5 323 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 COPZ2Q9P299 210 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 CHP2O43745 196 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 REM1O75628 298 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 STATHP02808 62 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 FURINP09958 794 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 SHC1P29353 583 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 AP3S2P59780 193 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 TXNDC8Q6A555 127 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 TCTN3Q6NUS6 607 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 Q6ZVU0 165 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 SERINC5Q86VE9 423 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 C1orf216Q8TAB5 229 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 CAPNS2Q96L46 248 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 CAMK1GQ96NX5 476 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 AIF1LQ9BQI0 150 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 IFT27Q9BW83 186 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 FAIM2Q9BWQ8 316 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 ERVMER34-1Q9H9K5 563 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 SCP2D1Q9UJQ7 156 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 H0YIV9 168 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 RP2O75695 350 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF865P0CJ78 1059 aaPredicted RBP12.31□□□□□ -0.44
TRIM35-201ENST00000305364 GJA5P36382 358 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 EPHA5P54756 1037 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 ST3GAL3Q11203 375 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 OPCMLQ14982 345 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF628Q5EBL2 1059 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 CPOQ8IVL8 374 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 GPALPP1Q8IXQ4 340 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 CBARPQ8N350 705 aaPredicted RBP12.31□□□□□ -0.44
TRIM35-201ENST00000305364 FAM26EQ8N5C1 309 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 ACTR6Q9GZN1 396 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 CXorf36Q9H7Y0 433 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 SPATA6Q9NWH7 488 aaPredicted RBP12.31□□□□□ -0.44
TRIM35-201ENST00000305364 PTTG3PQ9NZH4 202 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 MARK1Q9P0L2 795 aa12.31□□□□□ -0.44
TRIM35-201ENST00000305364 CARNS1A5YM72 827 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 A8MVJ9 347 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 ARPC5O15511 151 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 EOMESO95936 686 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 MSL3P1P0C860 447 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 GCGRP47871 477 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 TRAM2Q15035 370 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 HMGB4Q8WW32 186 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 OSTF1Q92882 214 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 UCN3Q969E3 161 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 MVB12BQ9H7P6 319 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 CDH10Q9Y6N8 788 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 SEMG1P04279 462 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 TPOP07202 933 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 VIPR1P32241 457 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 PYCR1P32322 319 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 SOX9P48436 509 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 SPINT3P49223 89 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 MINDY4Q4G0A6 757 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 RTP2Q5QGT7 225 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 KCTD20Q7Z5Y7 419 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 F2RL3Q96RI0 385 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 C12orf10Q9HB07 376 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 PCDHB16Q9NRJ7 776 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 MRPL17Q9NRX2 175 aaKnown RBP12.3□□□□□ -0.44
TRIM35-201ENST00000305364 TEX10Q9NXF1 929 aaPredicted RBP12.3□□□□□ -0.44
TRIM35-201ENST00000305364 PLAGL1Q9UM63 463 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms