RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 ZNF705FA8MVS1 300 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 LILRB5O75023 590 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF705DP0CH99 300 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF705BP0CI00 300 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 GNB3P16520 340 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 TYRP1P17643 537 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 POLR2CP19387 275 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 KCNC4Q03721 635 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 TIGD5Q53EQ6 642 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 TXNDC5Q8NBS9 432 aaKnown RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 OR4D6Q8NGJ1 314 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 KIAA1191Q96A73 305 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 SMCO4Q9NRQ5 59 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ACRP10323 421 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ENDOUP21128 410 aaKnown RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ART1P52961 327 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 AARDQ4LEZ3 155 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ASRGL1Q7L266 308 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 FAM122BQ7Z309 247 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 PRR18Q8N4B5 295 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 OR8J3Q8NGG0 315 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 OR5H2Q8NGV7 314 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 SPRYD4Q8WW59 207 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 B3GNT2Q9NY97 397 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ABRACLQ9P1F3 81 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 BAZ2AQ9UIF9 1905 aaKnown RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 C10orf71Q711Q0 1435 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 OR6C65A6NJZ3 312 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 KLK3P07288 261 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 RHOP08100 348 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 MAOBP27338 520 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 SLC10A6Q3KNW5 377 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ANKRD54Q6NXT1 300 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 TTLL10Q6ZVT0 673 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 TMEM173Q86WV6 379 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 KCNJ9Q92806 393 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF559Q9BR84 538 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 COQ3Q9NZJ6 369 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 KCNK6Q9Y257 313 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ARVCFO00192 962 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 SCO2O43819 266 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 SEC14L2O76054 403 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 MYF6P23409 242 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 RAB35Q15286 201 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 SLC22A25Q6T423 547 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 GALNT10Q86SR1 603 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 OR2AP1Q8NGE2 309 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 OR2T11Q8NH01 316 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 TSGA13Q96PP4 275 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 RPS10P5Q9NQ39 176 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 GNG13Q9P2W3 67 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 GGT3PA6NGU5 568 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 UBFD1O14562 309 aaKnown RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 LATO43561 262 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 FMO6PO60774 539 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 KCNK2O95069 426 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 FXYD4P59646 89 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 PLCXD2Q0VAA5 305 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 RAB11BQ15907 218 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 NKPD1Q17RQ9 610 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 NIPAL3Q6P499 406 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 TMPPEQ6ZT21 453 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 LACC1Q8IV20 430 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 IGDCC3Q8IVU1 814 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 CMTM8Q8IZV2 173 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 IQCF1Q8N6M8 205 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 DPH2Q9BQC3 489 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 KLHL9Q9P2J3 617 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 NAALAD2Q9Y3Q0 740 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 F8W036 122 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ARSFP54793 590 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 RPS26P62854 115 aaKnown RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 PPA1Q15181 289 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 RPS26P11Q5JNZ5 115 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 C22orf39Q6P5X5 142 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 DCUN1D3Q8IWE4 304 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 CLDN19Q8N6F1 224 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 OR5AK2Q8NH90 309 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 HDHD5Q9BXW7 423 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 FBRSQ9HAH7 460 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 SCML2Q9UQR0 700 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 BACE2Q9Y5Z0 518 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 MPPED1O15442 326 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 AMY2AP04746 511 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 RAB31Q13636 194 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 FAM69AQ5T7M9 428 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 MAGIXQ9H6Y5 334 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 SRA1Q9HD15 236 aaKnown RBP5.29□□□□□ -1.56
CPSF2-201ENST00000298875 BCL9LQ86UU0 1499 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 DIRAS3O95661 229 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 ACVRL1P37023 503 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 KCNAB2Q13303 367 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 FIGNL1Q6PIW4 674 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 NPLOC4Q8TAT6 608 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 RNF128Q8TEB7 428 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 FUBP3Q96I24 572 aaKnown RBP eCLIP5.29□□□□□ -1.56
CPSF2-201ENST00000298875 DOHHQ9BU89 302 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 TMEM248Q9NWD8 314 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 LSM5Q9Y4Y9 91 aaKnown RBP5.29□□□□□ -1.56
CPSF2-201ENST00000298875 ABHD18Q0P651 414 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms