RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 ZNF285Q96NJ3 590 aa19.96■□□□□ 0.79
SOX17-201ENST00000297316 NUDT22Q9BRQ3 303 aa19.96■□□□□ 0.79
SOX17-201ENST00000297316 LHPPQ9H008 270 aa19.96■□□□□ 0.79
SOX17-201ENST00000297316 ERVK-18Q9QC07 812 aa19.96■□□□□ 0.79
SOX17-201ENST00000297316 RNF6Q9Y252 685 aa19.96■□□□□ 0.79
SOX17-201ENST00000297316 POFUT2Q9Y2G5 429 aa19.96■□□□□ 0.79
SOX17-201ENST00000297316 A0A1B0GTQ1 180 aa19.95■□□□□ 0.78
SOX17-201ENST00000297316 TMX2-CTNND1H3BSU7 103 aa19.95■□□□□ 0.78
SOX17-201ENST00000297316 GPR75O95800 540 aa19.95■□□□□ 0.78
SOX17-201ENST00000297316 KRT20P35900 424 aa19.95■□□□□ 0.78
SOX17-201ENST00000297316 CHRNEQ04844 493 aa19.95■□□□□ 0.78
SOX17-201ENST00000297316 COLEC12Q5KU26 742 aa19.95■□□□□ 0.78
SOX17-201ENST00000297316 DGAT2L6Q6ZPD8 337 aa19.95■□□□□ 0.78
SOX17-201ENST00000297316 SLC38A1Q9H2H9 487 aa19.95■□□□□ 0.78
SOX17-201ENST00000297316 DUX1O43812 170 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 RANBP1P43487 201 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 DCTN2Q13561 401 aaKnown RBP19.94■□□□□ 0.78
SOX17-201ENST00000297316 FGD3Q5JSP0 725 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 GTF2IRD2BQ6EKJ0 949 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 GTF2IRD2Q86UP8 949 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 KRT73Q86Y46 540 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 SLC16A11Q8NCK7 471 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 SAP25Q8TEE9 199 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 C12orf43Q96C57 262 aaKnown RBP19.94■□□□□ 0.78
SOX17-201ENST00000297316 SLC35A4Q96G79 324 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 DHRS1Q96LJ7 313 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 PSD2Q9BQI7 771 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 SLC6A14Q9UN76 642 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 A4GNTQ9UNA3 340 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 TGFBR3LH3BV60 316 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 CT62P0C5K7 136 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 PCMT1P22061 227 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 ELAVL4P26378 380 aaKnown RBP19.94■□□□□ 0.78
SOX17-201ENST00000297316 GGT2P36268 569 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 MAGEA8P43361 318 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 MAPK10P53779 464 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 EMP3P54852 163 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 PIN1Q13526 163 aaPredicted RBP19.94■□□□□ 0.78
SOX17-201ENST00000297316 LPAL2Q16609 132 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 ZNF628Q5EBL2 1059 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 TMPRSS9Q7Z410 1059 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 TAGAPQ8N103 731 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 MMABQ96EY8 250 aaPredicted RBP19.94■□□□□ 0.78
SOX17-201ENST00000297316 NODALQ96S42 347 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 ACAD8Q9UKU7 415 aa19.94■□□□□ 0.78
SOX17-201ENST00000297316 ATXN7L1Q9ULK2 861 aaPredicted RBP19.94■□□□□ 0.78
SOX17-201ENST00000297316 TMEM221A6NGB7 291 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 A8MVJ9 347 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 M0R129 80 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 M0R296 226 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 NT5EP21589 574 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 SLC35A2P78381 396 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 MFSD12Q6NUT3 480 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 GUSBP11Q6P575 273 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 KLHL17Q6TDP4 642 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 OR6T1Q8NGN1 323 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 RASSF5Q8WWW0 418 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 ACTRT3Q9BYD9 372 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 CCDC90BQ9GZT6 254 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 GALNT8Q9NY28 637 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 NLGN3Q9NZ94 848 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 SUSD2Q9UGT4 822 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 MAU2Q9Y6X3 613 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 hCG_2014768A0A024R1R8 64 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 LY6G6EA0A0G2JKS1 128 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 CPED1A4D0V7 1026 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 SEC14L2O76054 403 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 DCKP27707 260 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 ANXA11P50995 505 aaKnown RBP19.93■□□□□ 0.78
SOX17-201ENST00000297316 EXOSC7Q15024 291 aaKnown RBP19.93■□□□□ 0.78
SOX17-201ENST00000297316 NPTX1Q15818 432 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 OR2L13Q8N349 312 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 TANKQ92844 425 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 CD180Q99467 661 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 DUSP21Q9H596 190 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 GAREM1Q9H706 876 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 NTMQ9P121 344 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 U3KQA8 63 aa19.93■□□□□ 0.78
SOX17-201ENST00000297316 A0A0G2JPF8 293 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 HNRNPCL2B2RXH8 293 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 HNRNPCL3B7ZW38 293 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 TMEM150CB9EJG8 249 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 SIGLEC6O43699 453 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 FCMRO60667 390 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 HNRNPCL4P0DMR1 293 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 GPR3P46089 330 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 PDX1P52945 283 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 NUP107P57740 925 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 NDUFA9Q16795 377 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 PERM1Q5SV97 790 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 VRK2Q86Y07 508 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 PLXDC1Q8IUK5 500 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 CCDC103Q8IW40 242 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 SAMD14Q8IZD0 417 aaPredicted RBP19.92■□□□□ 0.78
SOX17-201ENST00000297316 RNF217Q8TC41 542 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 SLC9A6Q92581 669 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 CDS1Q92903 461 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 TUBA1CQ9BQE3 449 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 FUZQ9BT04 418 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 PRR14Q9BWN1 585 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms