RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 A0A1W2PPM1 405 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 SERTM1A2A2V5 107 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 OR6C70A6NIJ9 312 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 CD8B2A6NJW9 211 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 TSPAN2O60636 221 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 SLCO1A2P46721 670 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 BTKQ06187 659 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 C9orf106Q8NAJ2 232 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 KIF18AQ8NI77 898 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 RNASE6Q93091 150 aaKnown RBP22.96■■□□□ 1.27
U2AF1-201ENST00000291552 COL21A1Q96P44 957 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 FOLH1BQ9HBA9 442 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 TNFRSF12AQ9NP84 129 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 MID1IP1Q9NPA3 183 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 SLC35C2Q9NQQ7 365 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 SIRT5Q9NXA8 310 aa22.96■■□□□ 1.27
U2AF1-201ENST00000291552 DNAJB12Q9NXW2 375 aaKnown RBP22.96■■□□□ 1.27
U2AF1-201ENST00000291552 KIF2AO00139 706 aaPredicted RBP22.95■■□□□ 1.26
U2AF1-201ENST00000291552 REM1O75628 298 aa22.95■■□□□ 1.26
U2AF1-201ENST00000291552 KIR2DL3P43628 341 aa22.95■■□□□ 1.26
U2AF1-201ENST00000291552 ZYG11AQ6WRX3 759 aa22.95■■□□□ 1.26
U2AF1-201ENST00000291552 GPATCH1Q9BRR8 931 aaKnown RBP22.95■■□□□ 1.26
U2AF1-201ENST00000291552 ZNF629Q9UEG4 869 aaPredicted RBP22.95■■□□□ 1.26
U2AF1-201ENST00000291552 FAM221AA4D161 298 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 C17orf51A8MQB3 221 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 PLOD3O60568 738 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 ERN1O75460 977 aaKnown RBP22.94■■□□□ 1.26
U2AF1-201ENST00000291552 BCAS2O75934 225 aaPredicted RBP22.94■■□□□ 1.26
U2AF1-201ENST00000291552 ACTL6AO96019 429 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 IL2RAP01589 272 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 PROCP04070 461 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 ANXA4P09525 319 aaPredicted RBP22.94■■□□□ 1.26
U2AF1-201ENST00000291552 AGFG1P52594 562 aaKnown RBP22.94■■□□□ 1.26
U2AF1-201ENST00000291552 HEPACAMQ14CZ8 416 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 PLXDC2Q6UX71 529 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 FAM9CQ8IZT9 166 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 CCNYL1Q8N7R7 359 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.94■■□□□ 1.26
U2AF1-201ENST00000291552 RDH11Q8TC12 318 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 ADOQ96SZ5 270 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 TUBA1CQ9BQE3 449 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 G6PC3Q9BUM1 346 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 CALHM2Q9HA72 323 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 FBXL2Q9UKC9 423 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 WIF1Q9Y5W5 379 aa22.94■■□□□ 1.26
U2AF1-201ENST00000291552 NF1P21359 2839 aa22.93■■□□□ 1.26
U2AF1-201ENST00000291552 CBR3O75828 277 aa22.93■■□□□ 1.26
U2AF1-201ENST00000291552 SHBGP04278 402 aa22.93■■□□□ 1.26
U2AF1-201ENST00000291552 DDCP20711 480 aa22.93■■□□□ 1.26
U2AF1-201ENST00000291552 GAS1P54826 345 aa22.93■■□□□ 1.26
U2AF1-201ENST00000291552 GFRA1P56159 465 aa22.93■■□□□ 1.26
U2AF1-201ENST00000291552 ERCC6LQ2NKX8 1250 aa22.93■■□□□ 1.26
U2AF1-201ENST00000291552 ADGRE4PQ86SQ3 457 aa22.93■■□□□ 1.26
U2AF1-201ENST00000291552 SAMD14Q8IZD0 417 aaPredicted RBP22.93■■□□□ 1.26
U2AF1-201ENST00000291552 OR4N2Q8NGD1 307 aa22.93■■□□□ 1.26
U2AF1-201ENST00000291552 ZPLD1Q8TCW7 415 aa22.93■■□□□ 1.26
U2AF1-201ENST00000291552 LIME1Q9H400 295 aa22.93■■□□□ 1.26
U2AF1-201ENST00000291552 GIMAP4Q9NUV9 329 aa22.93■■□□□ 1.26
U2AF1-201ENST00000291552 ACANP16112 2415 aa22.93■■□□□ 1.26
U2AF1-201ENST00000291552 MYO1GB0I1T2 1018 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 CPN1P15169 458 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 ART1P52961 327 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 ZNF763Q0D2J5 394 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 SF3B4Q15427 424 aaKnown RBP eCLIP22.92■■□□□ 1.26
U2AF1-201ENST00000291552 FLYWCH1Q4VC44 716 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 FAM71E1Q6IPT2 247 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 FRMD7Q6ZUT3 714 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 LARP4Q71RC2 724 aaKnown RBP eCLIP22.92■■□□□ 1.26
U2AF1-201ENST00000291552 PLCZ1Q86YW0 608 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 OR14L1PQ8NHC6 308 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 CDC26Q8NHZ8 85 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 TMCO6Q96DC7 493 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 C12orf65Q9H3J6 166 aaKnown RBP22.92■■□□□ 1.26
U2AF1-201ENST00000291552 RASSF1Q9NS23 344 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 JKAMPQ9P055 326 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 DCDC2Q9UHG0 476 aa22.92■■□□□ 1.26
U2AF1-201ENST00000291552 ABCB7O75027 752 aa22.91■■□□□ 1.26
U2AF1-201ENST00000291552 GLRA3O75311 464 aa22.91■■□□□ 1.26
U2AF1-201ENST00000291552 MYL2P10916 166 aa22.91■■□□□ 1.26
U2AF1-201ENST00000291552 CTSSP25774 331 aa22.91■■□□□ 1.26
U2AF1-201ENST00000291552 GSTM5P46439 218 aa22.91■■□□□ 1.26
U2AF1-201ENST00000291552 STARP49675 285 aa22.91■■□□□ 1.26
U2AF1-201ENST00000291552 LHX2P50458 406 aa22.91■■□□□ 1.26
U2AF1-201ENST00000291552 IST1P53990 364 aa22.91■■□□□ 1.26
U2AF1-201ENST00000291552 PSG6Q00889 435 aa22.91■■□□□ 1.26
U2AF1-201ENST00000291552 C2orf80Q0P641 193 aa22.91■■□□□ 1.26
U2AF1-201ENST00000291552 FOXF2Q12947 444 aa22.91■■□□□ 1.26
U2AF1-201ENST00000291552 SLC44A2Q8IWA5 706 aaPredicted RBP22.91■■□□□ 1.26
U2AF1-201ENST00000291552 TRIM42Q8IWZ5 723 aa22.91■■□□□ 1.26
U2AF1-201ENST00000291552 EFHD2Q96C19 240 aaPredicted RBP22.91■■□□□ 1.26
U2AF1-201ENST00000291552 POLDIP3Q9BY77 421 aaKnown RBP22.91■■□□□ 1.26
U2AF1-201ENST00000291552 CBLCQ9ULV8 474 aa22.91■■□□□ 1.26
U2AF1-201ENST00000291552 POLR3HQ9Y535 204 aaPredicted RBP22.91■■□□□ 1.26
U2AF1-201ENST00000291552 CCDC151A5D8V7 595 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 PLIN3O60664 434 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 CYP4B1P13584 511 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 GRK2P25098 689 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 SRD5A2P31213 254 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 MC3RP41968 323 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 RIPPLY3P57055 190 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms