RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 A0A0U1RQK1 487 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 OR6C65A6NJZ3 312 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 STMND1H3BQB6 276 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 GABRA3P34903 492 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 CA5AP35218 305 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 RNF144AP50876 292 aaPredicted RBP10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 POU4F2Q12837 409 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 GK2Q14410 553 aaPredicted RBP10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 RAB11BQ15907 218 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 DESI1Q6ICB0 168 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 CORO6Q6QEF8 472 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 BOLLQ8N9W6 283 aaKnown RBP10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 DBF4BQ8NFT6 615 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 TMEM234Q8WY98 164 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 GIMAP5Q96F15 307 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 FBXL18Q96ME1 805 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 MFFQ9GZY8 342 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 CERS4Q9HA82 394 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 POPDC3Q9HBV1 291 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 A8MU76 341 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 SNAI1O95863 264 aaPredicted RBP10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 TRAPPC2P0DI81 140 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 TRAPPC2BP0DI82 140 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 HOXB9P17482 250 aaPredicted RBP10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 PFKLP17858 780 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 SELENOVP59797 346 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 CYCSP99999 105 aaKnown RBP10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 GALK2Q01415 458 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 CDC20Q12834 499 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 ZC3H14Q6PJT7 736 aaKnown RBP10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 FAM83HQ6ZRV2 1179 aaPredicted RBP10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 PXKQ7Z7A4 578 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 ZFAND4Q86XD8 727 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 SLC35F5Q8WV83 523 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 HMGB4Q8WW32 186 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 MOCOSQ96EN8 888 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 SYNPO2LQ9H987 977 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 LIPT1Q9Y234 373 aa10.23□□□□□ -0.77
PKNOX1-201ENST00000291547 SULT1C2O00338 296 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 BCAS1O75363 584 aaPredicted RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 EEDO75530 441 aaKnown RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 RFPL3O75679 317 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 INHAP05111 366 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 CDK2P24941 298 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 TIA1P31483 386 aaKnown RBP eCLIP10.22□□□□□ -0.776e-8■■■□□ 17.6
PKNOX1-201ENST00000291547 RIDAP52758 137 aaKnown RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 CRYZQ08257 329 aaKnown RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 KCNC3Q14003 757 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 TECRLQ5HYJ1 363 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 TXNDC8Q6A555 127 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 ZDHHC14Q8IZN3 488 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 BEST4Q8NFU0 473 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 SNAPC3Q92966 411 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 MS4A4AQ96JQ5 239 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 MYRFLQ96LU7 910 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 CNN2Q99439 309 aaKnown RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 SYT3Q9BQG1 590 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 Q9Y3F1 56 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 PTGDR2Q9Y5Y4 395 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 LOC105369274A0A096LPK9 316 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 TSTD3H0UI37 97 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 MITFO75030 526 aaPredicted RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 SNU13P55769 128 aaKnown RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 ENPP6Q6UWR7 440 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 KCTD20Q7Z5Y7 419 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 NRROSQ86YC3 692 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 CMTM8Q8IZV2 173 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 OR4N4Q8N0Y3 316 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 LILRB2Q8N423 598 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 DCUN1D4Q92564 292 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 DKKL1Q9UK85 242 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 F5H5P2 479 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 OIP5O43482 229 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 SGCEO43556 437 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 ALDOBP05062 364 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 FHP07954 510 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 CERS1P27544 350 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 POLR2HP52434 150 aaKnown RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 PER3P56645 1201 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 ZNF33AQ06730 810 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 MLC1Q15049 377 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 NKPD1Q17RQ9 610 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 METTL11BQ5VVY1 283 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 LIPJQ5W064 366 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 BLOC1S3Q6QNY0 202 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 Q6ZVL8 140 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 PIWIL3Q7Z3Z3 882 aaKnown RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 SYT14Q8NB59 555 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 DNAAF1Q8NEP3 725 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 NUP43Q8NFH3 380 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 OR5H2Q8NGV7 314 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 ADAMTS19Q8TE59 1207 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 C3orf49Q96BT1 292 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 LMF1Q96S06 567 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 CDC6Q99741 560 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 SLC6A16Q9GZN6 736 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 SMOC2Q9H3U7 446 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 MRM3Q9HC36 420 aaKnown RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 ATP13A2Q9NQ11 1180 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 ZFP57Q9NU63 452 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms