RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ART3Q13508 389 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 SWI5Q1ZZU3 235 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 GXYLT1Q4G148 440 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 ARL13AQ5H913 290 aaPredicted RBP8.95□□□□□ -0.98
CCDC58-201ENST00000291458 EMC4Q5J8M3 183 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 CEP85LQ5SZL2 805 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 KANK2Q63ZY3 851 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 FAM71E1Q6IPT2 247 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 WDR93Q6P2C0 686 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 NPSR1Q6W5P4 371 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 RGS9BPQ6ZS82 235 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 ZNF551Q7Z340 670 aaPredicted RBP8.95□□□□□ -0.98
CCDC58-201ENST00000291458 GALNT10Q86SR1 603 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 SLC44A2Q8IWA5 706 aaPredicted RBP8.95□□□□□ -0.98
CCDC58-201ENST00000291458 DND1Q8IYX4 353 aaKnown RBP8.95□□□□□ -0.98
CCDC58-201ENST00000291458 SLC34A3Q8N130 599 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 OR4N2Q8NGD1 307 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 ZNF675Q8TD23 568 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 TP53INP1Q96A56 240 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 EFHD2Q96C19 240 aaPredicted RBP8.95□□□□□ -0.98
CCDC58-201ENST00000291458 OTUB1Q96FW1 271 aaPredicted RBP8.95□□□□□ -0.98
CCDC58-201ENST00000291458 GNRHR2Q96P88 292 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 VKORC1Q9BQB6 163 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 TUBB1Q9H4B7 451 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 SERHLQ9NQF3 203 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 DDX18Q9NVP1 670 aaKnown RBP8.95□□□□□ -0.98
CCDC58-201ENST00000291458 C1orf109Q9NX04 203 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 MKS1Q9NXB0 559 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 COQ3Q9NZJ6 369 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 BAIAP2L1Q9UHR4 511 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 ZNF639Q9UID6 485 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 MED12Q93074 2177 aa8.95□□□□□ -0.98
CCDC58-201ENST00000291458 SERTM1A2A2V5 107 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 KDM4EB2RXH2 506 aaPredicted RBP8.94□□□□□ -0.98
CCDC58-201ENST00000291458 SLC28A1O00337 649 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 BCKDKO14874 412 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 PDPK1O15530 556 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 HNRNPRO43390 633 aaKnown RBP8.94□□□□□ -0.98
CCDC58-201ENST00000291458 GMFGO60234 142 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 TRIM3O75382 744 aaPredicted RBP8.94□□□□□ -0.98
CCDC58-201ENST00000291458 NEFHP12036 1026 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 SDC1P18827 310 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 ACVR2AP27037 513 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 CASP3P42574 277 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 NAA20P61599 178 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 RPP38P78345 283 aaKnown RBP8.94□□□□□ -0.98
CCDC58-201ENST00000291458 ZNF630Q2M218 657 aaPredicted RBP8.94□□□□□ -0.98
CCDC58-201ENST00000291458 EIPR1Q53HC9 387 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 ZNF385BQ569K4 471 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 WIPI1Q5MNZ9 446 aaPredicted RBP8.94□□□□□ -0.98
CCDC58-201ENST00000291458 DCST1Q5T197 706 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 WLSQ5T9L3 541 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 OR5M10Q6IEU7 315 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 XKRXQ6PP77 449 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 LARP4Q71RC2 724 aaKnown RBP eCLIP8.94□□□□□ -0.981e-14■■□□□ 13
CCDC58-201ENST00000291458 YRDCQ86U90 279 aaKnown RBP8.94□□□□□ -0.98
CCDC58-201ENST00000291458 CNPY4Q8N129 248 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 PHF10Q8WUB8 498 aaKnown RBP8.94□□□□□ -0.98
CCDC58-201ENST00000291458 RND1Q92730 232 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 HGDQ93099 445 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 SARAFQ96BY9 339 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 PPCDCQ96CD2 204 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 CTHRC1Q96CG8 243 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 HSPBAP1Q96EW2 488 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 ADOQ96SZ5 270 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 PAIP2Q9BPZ3 127 aaKnown RBP8.94□□□□□ -0.98
CCDC58-201ENST00000291458 UCK2Q9BZX2 261 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 GLIPR2Q9H4G4 154 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 SH3BP4Q9P0V3 963 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 CAMK2AQ9UQM7 478 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 RNF6Q9Y252 685 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 C15orf41Q9Y2V0 281 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 DNAJC15Q9Y5T4 150 aa8.94□□□□□ -0.98
CCDC58-201ENST00000291458 KLF2Q9Y5W3 355 aaPredicted RBP8.94□□□□□ -0.98
CCDC58-201ENST00000291458 H3BQF6 201 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 AQP7O14520 342 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 LSM1O15116 133 aaKnown RBP8.93□□□□□ -0.98
CCDC58-201ENST00000291458 NPHS1O60500 1241 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 PEX11AO75192 247 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 COQ9O75208 318 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 HSPA4LO95757 839 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 IGHG3P01860 377 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 ARRB2P32121 409 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 MPIP34949 423 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 CDK9P50750 372 aaKnown RBP8.93□□□□□ -0.98
CCDC58-201ENST00000291458 PRKAG1P54619 331 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 CHI3L2Q15782 390 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 PDCD2Q16342 344 aaPredicted RBP8.93□□□□□ -0.98
CCDC58-201ENST00000291458 TBCELQ5QJ74 424 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 C1orf185Q5T7R7 199 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 FNDC7Q5VTL7 733 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 TMEM211Q6ICI0 200 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 GALNT18Q6P9A2 607 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 B3GNT6Q6ZMB0 384 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 MCEMP1Q8IX19 187 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 SAMD14Q8IZD0 417 aaPredicted RBP8.93□□□□□ -0.98
CCDC58-201ENST00000291458 ANKRD42Q8N9B4 389 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 C17orf47Q8NEP4 570 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 OR1J4Q8NGS1 313 aa8.93□□□□□ -0.98
CCDC58-201ENST00000291458 NEIL3Q8TAT5 605 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms