RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 SLC16A5O15375 505 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 MRPL3P09001 348 aaKnown RBP11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 MAP3K8P41279 467 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 DHCR24Q15392 516 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 TATDN3Q17R31 274 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 ATAD3CQ5T2N8 411 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 PAMR1Q6UXH9 720 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 OR4N5Q8IXE1 308 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 OTUB2Q96DC9 234 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 SGTBQ96EQ0 304 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 GON7Q9BXV9 100 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 SRMSQ9H3Y6 488 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 ACOT13Q9NPJ3 140 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 SLC6A13Q9NSD5 602 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 SOHLH2Q9NX45 425 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 RP1P56715 2156 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 DNAJC13O75165 2243 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 A0A1B0GV50 99 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 ANKRD33BA6NCL7 494 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 HMX3A6NHT5 357 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 C1orf196B1AJZ1 125 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 CREBL2O60519 120 aaPredicted RBP11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 ENDOUP21128 410 aaKnown RBP11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 MPIP34949 423 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 ADH7P40394 386 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 GSTM4Q03013 218 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 KCNC3Q14003 757 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 TOMM20Q15388 145 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 FLYWCH1Q4VC44 716 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 ENPP7Q6UWV6 458 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 SLC39A11Q8N1S5 342 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 PARP16Q8N5Y8 322 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 CELF2-AS1Q8N7Q2 184 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 OR8K5Q8NH50 307 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 TCEAL3Q969E4 200 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 LRR1Q96L50 414 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 OR4K3Q96R72 315 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 RETREG1Q9H6L5 497 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 NMNAT1Q9HAN9 279 aaPredicted RBP11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 LYARQ9NX58 379 aaKnown RBP11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF831Q5JPB2 1677 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 LOC102723532A0A0G2JNH3 316 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 SLC35G6P0C7Q6 338 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 GIMD1P0DJR0 217 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 ACVR2AP27037 513 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 PSMB5P28074 263 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 ACVR1BP36896 505 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 NKG7Q16617 165 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 SOWAHCQ53LP3 525 aaPredicted RBP11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 COX20Q5RI15 118 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 GRHL2Q6ISB3 625 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 FAM122CQ6P4D5 195 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 WDR53Q7Z5U6 358 aaPredicted RBP11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 CEACAM19Q7Z692 300 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 SERPINA11Q86U17 422 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 LNX2Q8N448 690 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 GDPD1Q8N9F7 314 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 OR7G2Q8NG99 324 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF300Q96RE9 604 aaPredicted RBP11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 PPA2Q9H2U2 334 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 FZD3Q9NPG1 666 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 MEMO1Q9Y316 297 aa11.9□□□□□ -0.5
SLC6A1-201ENST00000287766 KCNK5O95279 499 aa11.9□□□□□ -0.51
SLC6A1-201ENST00000287766 TFPIP10646 304 aa11.9□□□□□ -0.51
SLC6A1-201ENST00000287766 GSTM3P21266 225 aa11.9□□□□□ -0.51
SLC6A1-201ENST00000287766 UQCRC2P22695 453 aa11.9□□□□□ -0.51
SLC6A1-201ENST00000287766 PYCR1P32322 319 aa11.9□□□□□ -0.51
SLC6A1-201ENST00000287766 HOXC5Q00444 222 aa11.9□□□□□ -0.51
SLC6A1-201ENST00000287766 ZNF155Q12901 538 aaPredicted RBP11.9□□□□□ -0.51
SLC6A1-201ENST00000287766 TCEAL5Q5H9L2 206 aa11.9□□□□□ -0.51
SLC6A1-201ENST00000287766 OR52N2Q8NGI0 321 aa11.9□□□□□ -0.51
SLC6A1-201ENST00000287766 SLC2A11Q9BYW1 496 aa11.9□□□□□ -0.51
SLC6A1-201ENST00000287766 DPEP2Q9H4A9 486 aa11.9□□□□□ -0.51
SLC6A1-201ENST00000287766 INSL6Q9Y581 213 aa11.9□□□□□ -0.51
SLC6A1-201ENST00000287766 TCRBV5S2A0A599 114 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 ARHGEF15O94989 841 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 TNFSF8P32971 234 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 MAP4K2Q12851 820 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 PUM1Q14671 1186 aaKnown RBP eCLIP11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 STK11Q15831 433 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 AGAP7PQ5VUJ5 663 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 STEAP3Q658P3 488 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 GTF2IRD2BQ6EKJ0 949 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 GTF2IRD2Q86UP8 949 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 COX18Q8N8Q8 333 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 B3GNT7Q8NFL0 401 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 OR2L8Q8NGY9 312 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 NXPE2Q96DL1 559 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 NELL2Q99435 816 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 SLC6A16Q9GZN6 736 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 RGCCQ9H4X1 137 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 CDH10Q9Y6N8 788 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 ATP6V1G2-DDX39BF2Z307 99 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 RBBP9O75884 186 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 FGF19O95750 216 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 ALDOBP05062 364 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 PCSK2P16519 638 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 HYAL2Q12891 473 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 RHEBQ15382 184 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms