RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 GALNTL5Q7Z4T8 443 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 SPATA21Q7Z572 469 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 CPLX4Q7Z7G2 160 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 SLC34A3Q8N130 599 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 CISD2Q8N5K1 135 aaKnown RBP11.75□□□□□ -0.53
SS18-202ENST00000269138 HORMAD2Q8N7B1 307 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 FAM13CQ8NE31 585 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 OR56A1Q8NGH5 318 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 GOT1L1Q8NHS2 421 aaPredicted RBP11.75□□□□□ -0.53
SS18-202ENST00000269138 PIK3R3Q92569 461 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 SLC9A6Q92581 669 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 SPDL1Q96EA4 605 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 C5orf34Q96MH7 638 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 PANX1Q96RD7 426 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 SERHL2Q9H4I8 314 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 SH2D2AQ9NP31 389 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 SAR1AQ9NR31 198 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 DEPPQ9NTK1 212 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 ANAPC2Q9UJX6 822 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 OR10H1Q9Y4A9 318 aa11.75□□□□□ -0.53
SS18-202ENST00000269138 A0A0G2JMM0 328 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 RNF103-CHMP3A0A140T963 221 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 A0A1W2PPB8 328 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 A0A1W2PRS3 328 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 KIR3DP1A8MWS1 328 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 B8ZZF3 427 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 NME2P1O60361 137 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 REM1O75628 298 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 PPM1BO75688 479 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 NKX2-2O95096 273 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 NME2P22392 152 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 UQCRC2P22695 453 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 MLLT10P55197 1068 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 KCNK10P57789 538 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 GPR85P60893 370 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 IRX1P78414 480 aaPredicted RBP11.74□□□□□ -0.53
SS18-202ENST00000269138 PMP22Q01453 160 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 PLCXD2Q0VAA5 305 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 ZNHIT3Q15649 155 aaPredicted RBP11.74□□□□□ -0.53
SS18-202ENST00000269138 NTRK2Q16620 822 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 GTDC1Q4AE62 458 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 BICRALQ6AI39 1079 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 DNAJC14Q6Y2X3 702 aaPredicted RBP11.74□□□□□ -0.53
SS18-202ENST00000269138 CDRT4Q8N9R6 151 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 PSD4Q8NDX1 1056 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 GPR151Q8TDV0 419 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 JADE3Q92613 823 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 GTF2H4Q92759 462 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 TMEM125Q96AQ2 219 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 SLC35A4Q96G79 324 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 SGCZQ96LD1 299 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 TAAR6Q96RI8 345 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 SLC35A5Q9BS91 424 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 TIMMDC1Q9NPL8 285 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 NTNG1Q9Y2I2 539 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 KCNE3Q9Y6H6 103 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 CFAP46Q8IYW2 2715 aa11.74□□□□□ -0.53
SS18-202ENST00000269138 PINLYPA6NC86 204 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 TTLL8A6PVC2 850 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 RFXANKO14593 260 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 SNX3O60493 162 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 TSPAN2O60636 221 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 UGT2B11O75310 529 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 IGKV1D-16P01601 117 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 ALOX5P09917 674 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 PTPN6P29350 595 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 PIGAP37287 484 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 MAN2A2P49641 1150 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 PRIM2P49643 509 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 KLF10Q13118 480 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 PAGE3Q5JUK9 113 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 SAXO2Q658L1 398 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 CDC73Q6P1J9 531 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 MSANTD1Q6ZTZ1 278 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.73□□□□□ -0.53
SS18-202ENST00000269138 GALNT10Q86SR1 603 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 SULF2Q8IWU5 870 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 BCORP1Q8N888 145 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 GOLM1Q8NBJ4 401 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 PAQR8Q8TEZ7 354 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 HGDQ93099 445 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 MOAP1Q96BY2 351 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 EFHD2Q96C19 240 aaPredicted RBP11.73□□□□□ -0.53
SS18-202ENST00000269138 RMND5BQ96G75 393 aaPredicted RBP11.73□□□□□ -0.53
SS18-202ENST00000269138 ITCHQ96J02 903 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 NODALQ96S42 347 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 ADOQ96SZ5 270 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 ACTRT3Q9BYD9 372 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 NMUR2Q9GZQ4 415 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 NSRP1Q9H0G5 558 aaKnown RBP11.73□□□□□ -0.53
SS18-202ENST00000269138 EPN3Q9H201 632 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 RMND5AQ9H871 391 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 PROK2Q9HC23 129 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 TMEM45AQ9NWC5 275 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 CNOT11Q9UKZ1 510 aaKnown RBP11.73□□□□□ -0.53
SS18-202ENST00000269138 CBLCQ9ULV8 474 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 VPS4AQ9UN37 437 aa11.73□□□□□ -0.53
SS18-202ENST00000269138 FAF1Q9UNN5 650 aaPredicted RBP11.73□□□□□ -0.53
SS18-202ENST00000269138 CHCHD2Q9Y6H1 151 aaPredicted RBP11.73□□□□□ -0.53
SS18-202ENST00000269138 COL6A6A6NMZ7 2263 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms