RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 COL19A1Q14993 1142 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 ZNF750Q32MQ0 723 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 OR2G6Q5TZ20 316 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 RSBN1Q5VWQ0 802 aaPredicted RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 C22orf42Q6IC83 251 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 ABHD17CQ6PCB6 329 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 TMEM184AQ6ZMB5 413 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 PRR23CQ6ZRP0 262 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 RASSF6Q6ZTQ3 369 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 RDH10Q8IZV5 341 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 GDPD1Q8N9F7 314 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 PSD4Q8NDX1 1056 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 TTLQ8NG68 377 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 OTUB1Q96FW1 271 aaPredicted RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 C16orf58Q96GQ5 468 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 ZNF681Q96N22 645 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 CDCA3Q99618 268 aaPredicted RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 ARHGAP9Q9BRR9 750 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 KATNB1Q9BVA0 655 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 FAIM2Q9BWQ8 316 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 S1PR5Q9H228 398 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 SLC6A20Q9NP91 592 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 TIGARQ9NQ88 270 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 MBNL1Q9NR56 388 aaKnown RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 TRPC4Q9UBN4 977 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 GPR55Q9Y2T6 319 aaPredicted RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 ATG4BQ9Y4P1 393 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 SPIN1Q9Y657 262 aaPredicted RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 A0A1W2PS29 197 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 IRGMA1A4Y4 181 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 HMX3A6NHT5 357 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 GPR89AB7ZAQ6 455 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 POLR1CO15160 346 aaPredicted RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 PLA2G10O15496 165 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 LRRTM2O43300 516 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 SLC35G4P0C7Q5 338 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 GPR89BP0CG08 455 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 HIST1H1TP22492 207 aaPredicted RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 ATP5A1P25705 553 aaKnown RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 SDC2P34741 201 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 PTGER1P34995 402 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 GPC1P35052 558 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 RUNX1T1Q06455 604 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 ZNF155Q12901 538 aaPredicted RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 HNRNPA0Q13151 305 aaKnown RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 SNAPC1Q16533 368 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 NDUFA5Q16718 116 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 CCDC92Q53HC0 331 aaPredicted RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 AADACL4Q5VUY2 407 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 SLC36A4Q6YBV0 504 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 ZNF730Q6ZMV8 503 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 ZNF517Q6ZMY9 492 aaPredicted RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 HMGN2P46Q86SG4 172 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 LAPTM4BQ86VI4 370 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 POGLUT1Q8NBL1 392 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 OR2L8Q8NGY9 312 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 NR4A3Q92570 626 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 RNFT2Q96EX2 444 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 PRR14Q9BWN1 585 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 ANKRD19PQ9H560 264 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 SEMA4GQ9NTN9 838 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 THAP10Q9P2Z0 257 aaPredicted RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 ZNF221Q9UK13 617 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 EXOSC1Q9Y3B2 195 aaKnown RBP11.68□□□□□ -0.54
BEST3-201ENST00000266661 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 A0A1W2PQL4 384 aaPredicted RBP11.67□□□□□ -0.54
BEST3-201ENST00000266661 FAM47E-STBD1D6RA91 191 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 C1QTNF3-AMACRE9PGA6 284 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 ZIC2O95409 532 aaPredicted RBP11.67□□□□□ -0.54
BEST3-201ENST00000266661 NFATC1O95644 943 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 LALBAP00709 142 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 HLA-DQB1P01920 261 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 THY1P04216 161 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 FHP07954 510 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 F3P13726 295 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 HOXB3P14651 431 aaPredicted RBP11.67□□□□□ -0.54
BEST3-201ENST00000266661 NTSP30990 170 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 CD79BP40259 229 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 RAB28P51157 221 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 FABP5Q01469 135 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 ACSM1Q08AH1 577 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 SLAMF1Q13291 335 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 FZD5Q13467 585 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 GNA13Q14344 377 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 LASP1Q14847 261 aaKnown RBP11.67□□□□□ -0.54
BEST3-201ENST00000266661 SLC9A5Q14940 896 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.67□□□□□ -0.54
BEST3-201ENST00000266661 FAM78AQ5JUQ0 283 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 ARMC4Q5T2S8 1044 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 AGBL4Q5VU57 503 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 SLC27A4Q6P1M0 643 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 RAB43Q86YS6 212 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 ARIH2OSQ8N7S6 290 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 ACOT4Q8N9L9 421 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 SYT14Q8NB59 555 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 ANKK1Q8NFD2 765 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 OR56A1Q8NGH5 318 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 MOAP1Q96BY2 351 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 ZG16BQ96DA0 208 aa11.67□□□□□ -0.54
BEST3-201ENST00000266661 GIMAP5Q96F15 307 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms