RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 POP7O75817 140 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 CHMP24386 653 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF791Q3KP31 576 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 PGBD2Q6P3X8 592 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 CXorf40BQ96DE9 158 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 CHFRQ96EP1 664 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 TMEM19Q96HH6 336 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 COQ10AQ96MF6 247 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 NIPAL2Q9H841 368 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 COPZ2Q9P299 210 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 HPGDSO60760 199 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 KCNJ13O60928 360 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 RP2O75695 350 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 EVI2BP34910 448 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 MLLT3P42568 568 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 ESCO2Q56NI9 601 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 TRIM46Q7Z4K8 759 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 CEACAM19Q7Z692 300 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 GNPDA2Q8TDQ7 276 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 MYLIPQ8WY64 445 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 NEDD4LQ96PU5 975 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 PIGUQ9H490 435 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 SLC25A37Q9NYZ2 338 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 THAP10Q9P2Z0 257 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 SCN5AQ14524 2016 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 ANXA2P2A6NMY6 339 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 WASHC1A8K0Z3 465 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 GABRR3A8MPY1 467 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 ANXA2P07355 339 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 OR12D1P0DN82 309 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 C6P13671 934 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 PRKACAP17612 351 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 APEX1P27695 318 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 AKT2P31751 481 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 SLC6A11P48066 632 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 SCRN3Q0VDG4 424 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 SLC9A5Q14940 896 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 FAM205BPQ63HN1 556 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 SBSNQ6UWP8 590 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 PARS2Q7L3T8 475 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 OR5P2Q8WZ92 322 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 RGMAQ96B86 450 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 NXPE2Q96DL1 559 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 DTD2Q96FN9 168 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 CDADC1Q9BWV3 514 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 NT5DC2Q9H857 520 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 YBX2Q9Y2T7 364 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 ASB4Q9Y574 426 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 HEBP2Q9Y5Z4 205 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 CFAP20Q9Y6A4 193 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 IQCMA0A1B0GVH7 501 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 E7EQ34 232 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 SCG5P05408 212 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 DRD5P21918 477 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 PSMA3P25788 255 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 RPS19P39019 145 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 TAS2R43P59537 309 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 LRRC32Q14392 662 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 C6orf120Q7Z4R8 191 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 HMGN2P46Q86SG4 172 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 ACBD7Q8N6N7 88 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 ASB12Q8WXK4 309 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 ECHDC3Q96DC8 303 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 TM9SF2Q99805 663 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 KLHL21Q9UJP4 597 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 PPIL1Q9Y3C6 166 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF879B4DU55 563 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 ANHXE9PGG2 379 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF670-ZNF695F2Z2N8 137 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 WWP2O00308 870 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF821O75541 412 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 PAHP00439 452 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF806P0C7X5 589 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 CSNK2A2P19784 350 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 PBX2P40425 430 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 RGS1Q08116 209 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 SLAMF1Q13291 335 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 LEXMQ3ZCV2 418 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 COMMD6Q7Z4G1 85 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 KRT77Q7Z794 578 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 NLGN4XQ8N0W4 816 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 OR6K6Q8NGW6 343 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 SLC6A15Q9H2J7 730 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 MGAT4CQ9UBM8 478 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF639Q9UID6 485 aa10.9□□□□□ -0.66
CLSTN3-201ENST00000266546 J3KTA2 159 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 C1SP09871 688 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 C1GALT1C1LP0DN25 315 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 SPNP16150 400 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 EPHA2P29317 976 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 MPIP34949 423 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 RRAS2P62070 204 aaPredicted RBP10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 CTBSQ01459 385 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 ZNF33BQ06732 778 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 PIN1Q13526 163 aaPredicted RBP10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 CREB3L2Q70SY1 520 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 RNF175Q8N4F7 328 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 SPERTQ8NA61 448 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 OR7G3Q8NG95 312 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 CD180Q99467 661 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms