RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SYNPOQ8N3V7 929 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 OR4L1Q8NH43 312 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 CD200R1Q8TD46 325 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 THAP4Q8WY91 577 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 RFT1Q96AA3 541 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 IMP4Q96G21 291 aaKnown RBP8.28□□□□□ -1.08
VAPB-201ENST00000265619 PPP3R2Q96LZ3 170 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 OR2M2Q96R28 347 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 MAP3K3Q99759 626 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 KCNK12Q9HB15 430 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 NANSQ9NR45 359 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 MED9Q9NWA0 146 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 NDRG3Q9UGV2 375 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 TDRD15B5MCY1 1934 aaKnown RBP8.28□□□□□ -1.08
VAPB-201ENST00000265619 PIKFYVEQ9Y2I7 2098 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 ANKDD1BA6NHY2 528 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 TLR4O00206 839 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 PRKRAO75569 313 aaKnown RBP8.27□□□□□ -1.08
VAPB-201ENST00000265619 GADD45GO95257 159 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 WNT1P04628 370 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 CRYBA1P05813 215 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 CTPS1P17812 591 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 FPR3P25089 353 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 CST5P28325 142 aaPredicted RBP8.27□□□□□ -1.08
VAPB-201ENST00000265619 WNT3P56703 355 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 TAF1AQ15573 450 aaPredicted RBP8.27□□□□□ -1.08
VAPB-201ENST00000265619 PLK5Q496M5 336 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 COX20Q5RI15 118 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 ZNF565Q8N9K5 539 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 PROKR2Q8NFJ6 384 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 GCDHQ92947 438 aaPredicted RBP8.27□□□□□ -1.08
VAPB-201ENST00000265619 PANX1Q96RD7 426 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 RSPO3Q9BXY4 272 aaPredicted RBP8.27□□□□□ -1.08
VAPB-201ENST00000265619 NMNAT1Q9HAN9 279 aaPredicted RBP8.27□□□□□ -1.08
VAPB-201ENST00000265619 BIN3Q9NQY0 253 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 SDHAF3Q9NRP4 125 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 DNAJC11Q9NVH1 559 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 C14orf105Q9NVL8 296 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 TAS2R13Q9NYV9 303 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 NPTNQ9Y639 398 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 RNF215Q9Y6U7 377 aa8.27□□□□□ -1.08
VAPB-201ENST00000265619 GON4LQ3T8J9 2241 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 SH3D21A4FU49 640 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 LOC730098B7Z3J9 87 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 MCRIP1C9JLW8 97 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 PRKYO43930 277 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 SDC3O75056 442 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 TFP02787 698 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 PIPP12273 146 aaPredicted RBP8.27□□□□□ -1.09
VAPB-201ENST00000265619 ZNF3P17036 446 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 ADCYAP1P18509 176 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 SDC1P18827 310 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 XKP51811 444 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 DGCR2P98153 550 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 MLLT1Q03111 559 aaPredicted RBP8.27□□□□□ -1.09
VAPB-201ENST00000265619 CPSF6Q16630 551 aaKnown RBP eCLIP8.27□□□□□ -1.09
VAPB-201ENST00000265619 IDNKQ5T6J7 187 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 RSPO2Q6UXX9 243 aaPredicted RBP8.27□□□□□ -1.09
VAPB-201ENST00000265619 HSD17B13Q7Z5P4 300 aaPredicted RBP8.27□□□□□ -1.09
VAPB-201ENST00000265619 NAGSQ8N159 534 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 CFAP52Q8N1V2 620 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 HUS1BQ8NHY5 278 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 KCNJ9Q92806 393 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 SGK3Q96BR1 496 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 APIPQ96GX9 242 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 SMAD5Q99717 465 aaKnown RBP8.27□□□□□ -1.09
VAPB-201ENST00000265619 MED18Q9BUE0 208 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 PTDSS2Q9BVG9 487 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 CACNG6Q9BXT2 260 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 CPEB1Q9BZB8 566 aaKnown RBP8.27□□□□□ -1.09
VAPB-201ENST00000265619 GOLGA4Q13439 2230 aaKnown RBP8.27□□□□□ -1.09
VAPB-201ENST00000265619 TRBV4-1A0A0J9YWV2 114 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 CASC3O15234 703 aaKnown RBP8.27□□□□□ -1.09
VAPB-201ENST00000265619 BNIP3LO60238 219 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 HPP00738 406 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 CBSLP0DN79 551 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 CBSP35520 551 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 IRS1P35568 1242 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 CHI3L1P36222 383 aaPredicted RBP8.27□□□□□ -1.09
VAPB-201ENST00000265619 GSTM5P46439 218 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 ALDH9A1P49189 494 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 FNTBP49356 437 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 AIF1P55008 147 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 OR10A3P58181 314 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 TAF10Q12962 218 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 SEC23BQ15437 767 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 CHRNA6Q15825 494 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 ZRANB3Q5FWF4 1079 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 XKR4Q5GH76 650 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 FAM27D1Q5T7N8 215 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 GOT1L1Q8NHS2 421 aaPredicted RBP8.27□□□□□ -1.09
VAPB-201ENST00000265619 TMEM169Q96HH4 297 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 NARS2Q96I59 477 aaKnown RBP8.27□□□□□ -1.09
VAPB-201ENST00000265619 MOGAT1Q96PD6 335 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 SPRTNQ9H040 489 aaPredicted RBP8.27□□□□□ -1.09
VAPB-201ENST00000265619 DNTTIP1Q9H147 329 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 CERS4Q9HA82 394 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 SLC6A20Q9NP91 592 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 PLSCR2Q9NRY7 297 aa8.27□□□□□ -1.09
VAPB-201ENST00000265619 TMEM161AQ9NX61 479 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms