RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 HMGA1P17096 107 aaKnown RBP11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 ENPP1P22413 925 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 WEE1P30291 646 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 LCN1P31025 176 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 BTCP35070 178 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 SOX18P35713 384 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 ZNF155Q12901 538 aaPredicted RBP11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 TSPAN31Q12999 210 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 GNA13Q14344 377 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 RTP2Q5QGT7 225 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 SLC22A10Q63ZE4 541 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 BHLHB9Q6PI77 547 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 ASPGQ86U10 573 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 PIAS4Q8N2W9 510 aaPredicted RBP11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 SDR16C5Q8N3Y7 309 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 SAMD12Q8N8I0 201 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 MORN4Q8NDC4 146 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 WFDC5Q8TCV5 224 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 SPRYD4Q8WW59 207 aaPredicted RBP11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 SOCS4Q8WXH5 440 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 SMPDL3AQ92484 453 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 OSTF1Q92882 214 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 RBP7Q96R05 134 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 DLL4Q9NR61 685 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 MARK1Q9P0L2 795 aa11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 ZFR2Q9UPR6 939 aaKnown RBP11.67□□□□□ -0.54
CHMP2B-201ENST00000263780 SHISA3A0PJX4 238 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 HMGN4O00479 90 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 RNF13O43567 381 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 SSNA1O43805 119 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 LANCL1O43813 399 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 MTX2O75431 263 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 ZNF821O75541 412 aaPredicted RBP11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 KLHL18O94889 574 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 SOX30O94993 753 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 ALDH1A1P00352 501 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 NR2F1P10589 423 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 NPPBP16860 134 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 ANXA11P50995 505 aaKnown RBP11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 RPS26P62854 115 aaKnown RBP11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 PRSS53Q2L4Q9 553 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 ZNF322Q6U7Q0 402 aaPredicted RBP11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 TMEM91Q6ZNR0 172 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 BTN2A1Q7KYR7 527 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 RRM2BQ7LG56 351 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 GPR135Q8IZ08 494 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 OR6C4Q8NGE1 309 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 BBS10Q8TAM1 723 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 RAB8BQ92930 207 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 DACT3Q96B18 629 aaPredicted RBP11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 TREX2Q9BQ50 279 aaPredicted RBP11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 TMEM168Q9H0V1 697 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 B4GALT6Q9UBX8 382 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 PCM1Q15154 2024 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 hCG_1807616A0A1W2PRN6 198 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 SLC5A10A0PJK1 596 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 ATP6V1G2-DDX39BF2Z307 99 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 PRRG1O14668 218 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 NPC1O15118 1278 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 CELF2O95319 508 aaKnown RBP11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 MPC2O95563 127 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 POP4O95707 220 aaKnown RBP11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 HTR1FP30939 366 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 NNMTP40261 264 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 TBPL1P62380 186 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 CCSMST1Q4G0I0 132 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 EOGTQ5NDL2 527 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 NXPE4Q6UWF7 544 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 BAIAP2L2Q6UXY1 529 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 SHFQ7M4L6 423 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 CMIPQ8IY22 773 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 UXS1Q8NBZ7 420 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 OR56B4Q8NH76 319 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 CEP76Q8TAP6 659 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 SLC5A11Q8WWX8 675 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 COQ10AQ96MF6 247 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 TMEM175Q9BSA9 504 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 SPRTNQ9H040 489 aaPredicted RBP11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 MED9Q9NWA0 146 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 FAM8A1Q9UBU6 413 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 CD84Q9UIB8 345 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 GPR52Q9Y2T5 361 aa11.66□□□□□ -0.54
CHMP2B-201ENST00000263780 OR2AG2A6NM03 316 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 HMGN1P05114 100 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 CXCL3P19876 107 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 GSG1Q2KHT4 349 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 NDUFAF5Q5TEU4 345 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 AADACL4Q5VUY2 407 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 MS4A15Q8N5U1 240 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 RPLP0P6Q8NHW5 317 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 SGPP1Q9BX95 441 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 EGLN3Q9H6Z9 239 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 MAN2C1Q9NTJ4 1040 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 MARCH5Q9NX47 278 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 COQ3Q9NZJ6 369 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 RNF181Q9P0P0 153 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 RABL2AQ9UBK7 228 aaPredicted RBP11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 PRKAG2Q9UGJ0 569 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 RABL2BQ9UNT1 228 aa11.65□□□□□ -0.54
CHMP2B-201ENST00000263780 NPTNQ9Y639 398 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms